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  5. Ceric.34G020500.1

Ceric.34G020500.1 (Ceric.34G020500)


Aliases : Ceric.34G020500

Description : EC_4.2 carbon-oxygen lyase & original description: pacid=50623356 polypeptide=Ceric.34G020500.1.p locus=Ceric.34G020500 ID=Ceric.34G020500.1.v2.1 annot-version=v2.1


Gene families : OG0000492 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000492_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.34G020500.1
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00123190 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.03 OrthoFinder output from all 47 species
AMTR_s00039p00186640 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.03 OrthoFinder output from all 47 species
AMTR_s00049p00173370 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.02 OrthoFinder output from all 47 species
AMTR_s00078p00106380 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.03 OrthoFinder output from all 47 species
AMTR_s00171p00044290 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.02 OrthoFinder output from all 47 species
AT1G11920 No alias Pectin lyase-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G24230 No alias Pectate lyase family protein 0.02 OrthoFinder output from all 47 species
AT3G24670 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G27400 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G22080 RHS14 root hair specific 14 0.05 OrthoFinder output from all 47 species
AT5G09280 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G48900 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
Ala_g16408 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10720 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20815 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g63228 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0008.g011291 No alias EC_4.2 carbon-oxygen lyase & original description: CDS=272-1573 0.02 OrthoFinder output from all 47 species
Azfi_s0032.g024858 No alias EC_4.2 carbon-oxygen lyase & original description: CDS=1-1242 0.03 OrthoFinder output from all 47 species
Azfi_s0033.g025097 No alias EC_4.2 carbon-oxygen lyase & original description: CDS=1-1140 0.03 OrthoFinder output from all 47 species
Ceric.05G036500.1 Ceric.05G036500 EC_4.2 carbon-oxygen lyase & original description:... 0.08 OrthoFinder output from all 47 species
Dac_g11741 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43009 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g40377 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46389 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g46894 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g03656 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13672 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15970 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003984001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.04 OrthoFinder output from all 47 species
GSVIVT01028548001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.03 OrthoFinder output from all 47 species
LOC_Os04g05050.1 LOC_Os04g05050 pectate lyase 0.02 OrthoFinder output from all 47 species
Len_g13639 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
MA_103716g0010 No alias pectate lyase 0.04 OrthoFinder output from all 47 species
MA_1164682g0010 No alias pectate lyase 0.02 OrthoFinder output from all 47 species
MA_474372g0010 No alias pectate lyase 0.01 OrthoFinder output from all 47 species
MA_6474333g0010 No alias Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen... 0.03 OrthoFinder output from all 47 species
Ore_g26214 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28391 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41164 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41165 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41450 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42589 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03086 RHS14 EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003136 No alias EC_4.2 carbon-oxygen lyase & original description: CDS=1-1299 0.03 OrthoFinder output from all 47 species
Sam_g16922 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g31391 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07683 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09317 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR002022 Pec_lyase 174 353
No external refs found!