1. Home
  2. Species
  3. Ceratopteris richardii
  4. Sequence
  5. Ceric.34G008900.1

Ceric.34G008900.1 (Ceric.34G008900)


Aliases : Ceric.34G008900

Description : nucleoporin of nuclear pore complex *(NUP214) & original description: pacid=50622726 polypeptide=Ceric.34G008900.1.p locus=Ceric.34G008900 ID=Ceric.34G008900.1.v2.1 annot-version=v2.1


Gene families : OG0003944 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003944_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.34G008900.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g084691 emb1011 nucleoporin of nuclear pore complex *(NUP214) & original... 0.05 OrthoFinder output from all 47 species
Aev_g17047 emb1011 nucleoporin of nuclear pore complex *(NUP214) & original... 0.03 OrthoFinder output from all 47 species
Ala_g15272 emb1011 nucleoporin of nuclear pore complex *(NUP214) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g32082 emb1011 nucleoporin of nuclear pore complex *(NUP214) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01025508001 emb1011 Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species
LOC_Os07g48602.1 LOC_Os07g48602 cytoplasmic nucleoporin (NUP214). NUP214 nucleoporin of... 0.04 OrthoFinder output from all 47 species
Lfl_g03504 emb1011 nucleoporin of nuclear pore complex *(NUP214) & original... 0.03 OrthoFinder output from all 47 species
MA_31606g0010 emb1011 cytoplasmic nucleoporin (NUP214). NUP214 nucleoporin of... 0.05 OrthoFinder output from all 47 species
Mp3g04100.1 emb1011 cytoplasmic nucleoporin (NUP214). NUP214 nucleoporin of... 0.05 OrthoFinder output from all 47 species
Msp_g31844 No alias nucleoporin of nuclear pore complex *(NUP214) & original... 0.03 OrthoFinder output from all 47 species
Solyc02g032380.3.1 emb1011, Solyc02g032380 cytoplasmic nucleoporin (NUP214). NUP214 nucleoporin of... 0.05 OrthoFinder output from all 47 species
Solyc02g032480.3.1 emb1011, Solyc02g032480 cytoplasmic nucleoporin (NUP214). NUP214 nucleoporin of... 0.05 OrthoFinder output from all 47 species
Solyc02g032490.3.1 emb1011, Solyc02g032490 Nuclear pore complex protein NUP214 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Tin_g11192 emb1011 nucleoporin of nuclear pore complex *(NUP214) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e035895_P006 emb1011, Zm00001e035895 cytoplasmic nucleoporin (NUP214). NUP214 nucleoporin of... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0007088 regulation of mitotic nuclear division IEP HCCA
BP GO:0007093 mitotic cell cycle checkpoint signaling IEP HCCA
BP GO:0007094 mitotic spindle assembly checkpoint signaling IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
BP GO:0010948 negative regulation of cell cycle process IEP HCCA
BP GO:0010965 regulation of mitotic sister chromatid separation IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP HCCA
BP GO:0031577 spindle checkpoint signaling IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0033045 regulation of sister chromatid segregation IEP HCCA
BP GO:0033046 negative regulation of sister chromatid segregation IEP HCCA
BP GO:0033047 regulation of mitotic sister chromatid segregation IEP HCCA
BP GO:0033048 negative regulation of mitotic sister chromatid segregation IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0045786 negative regulation of cell cycle IEP HCCA
BP GO:0045839 negative regulation of mitotic nuclear division IEP HCCA
BP GO:0045841 negative regulation of mitotic metaphase/anaphase transition IEP HCCA
BP GO:0045930 negative regulation of mitotic cell cycle IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0051783 regulation of nuclear division IEP HCCA
BP GO:0051784 negative regulation of nuclear division IEP HCCA
BP GO:0051983 regulation of chromosome segregation IEP HCCA
BP GO:0051985 negative regulation of chromosome segregation IEP HCCA
BP GO:0071173 spindle assembly checkpoint signaling IEP HCCA
BP GO:0071174 mitotic spindle checkpoint signaling IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901988 negative regulation of cell cycle phase transition IEP HCCA
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1901991 negative regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP HCCA
BP GO:1902100 negative regulation of metaphase/anaphase transition of cell cycle IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
BP GO:1905818 regulation of chromosome separation IEP HCCA
BP GO:1905819 negative regulation of chromosome separation IEP HCCA
BP GO:2000816 negative regulation of mitotic sister chromatid separation IEP HCCA
BP GO:2001251 negative regulation of chromosome organization IEP HCCA

No InterPro domains available for this sequence

No external refs found!