Ceric.33G065500.1 (AGL13, Ceric.33G065500)

Aliases : AGL13, Ceric.33G065500

Description : MADS/AGL-type transcription factor & original description: pacid=50607478 polypeptide=Ceric.33G065500.1.p locus=Ceric.33G065500 ID=Ceric.33G065500.1.v2.1 annot-version=v2.1

Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.33G065500.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00047p00190220	AGL4, SEP2,...	RNA biosynthesis.transcriptional activation.MADS box...	0.03	OrthoFinder output from all 47 species
AMTR_s00071p00198970	XAL1, AGL12,...	RNA biosynthesis.transcriptional activation.MADS box...	0.03	OrthoFinder output from all 47 species
AT2G24840	AGL61, DIA	AGAMOUS-like 61	0.04	OrthoFinder output from all 47 species
AT3G58780	AGL1, SHP1	K-box region and MADS-box transcription factor family protein	0.03	OrthoFinder output from all 47 species
Adi_g021209	AGL16	MADS/AGL-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Aev_g33529	AGL16	MADS/AGL-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Als_g11883	SHP2, AGL5	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Als_g13176	SHP2, AGL5	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g21518	SOC1, AGL20, ATSOC1	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g19952	SHP2, AGL5	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene09663.t1	Aspi01Gene09663	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene15809.t1	SHP2, AGL5,...	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene17593.t1	AGL104, Aspi01Gene17593	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene17800.t1	SHP2, AGL5,...	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene17818.t1	SHP2, AGL5,...	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene17818.t2	SHP2, AGL5,...	MADS/AGL-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Aspi01Gene19456.t1	SOC1, AGL20,...	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene49755.t1	Aspi01Gene49755	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene62317.t1	ANR1, AGL44,...	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g13784	SHP2, AGL5	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.37G052700.1	AGL104, Ceric.37G052700	MADS/AGL-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dde_g30103	SOC1, AGL20, ATSOC1	MADS/AGL-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Dde_g38503	AGL42	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g27385	AGL21	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01008560001	SOC1, AGL20, ATSOC1	RNA biosynthesis.transcriptional activation.MADS box...	0.02	OrthoFinder output from all 47 species
GSVIVT01012249001	AGL2, SEP1	RNA biosynthesis.transcriptional activation.MADS box...	0.03	OrthoFinder output from all 47 species
GSVIVT01015649001	No alias	No description available	0.03	OrthoFinder output from all 47 species
Gb_28587	AGL8, FUL	transcription factor (MADS/AGL)	0.06	OrthoFinder output from all 47 species
LOC_Os06g06750.1	AGL9, SEP3,...	transcription factor (MADS/AGL)	0.04	OrthoFinder output from all 47 species
LOC_Os10g39130.1	GL19, AGL19,...	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
Len_g28933	GL19, AGL19	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Lfl_g26035	AGL7, AP1	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g38767	SOC1, AGL20, ATSOC1	MADS/AGL-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
MA_19007g0010	AGL3, SEP4	transcription factor (MADS/AGL)	0.04	OrthoFinder output from all 47 species
MA_458668g0010	SOC1, AGL20, ATSOC1	transcription factor (MADS/AGL)	0.04	OrthoFinder output from all 47 species
MA_6042439g0010	AGL9, SEP3	transcription factor (MADS/AGL)	0.05	OrthoFinder output from all 47 species
MA_9771g0010	SHP2, AGL5	transcription factor (MADS/AGL)	0.05	OrthoFinder output from all 47 species
Nbi_g12231	AGL13	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g42894	AGL17	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g46921	SOC1, AGL20, ATSOC1	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g60105	AGL18	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g60165	STK, AGL11	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006239	SHP2, AGL5	not classified & original description: CDS=497-1018	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012908	GL19, AGL19	MADS/AGL-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Sam_g26914	No alias	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Solyc02g065730.2.1	AGL8, FUL, Solyc02g065730	transcription factor (MADS/AGL)	0.04	OrthoFinder output from all 47 species
Solyc07g150138.1.1	Solyc07g150138	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Solyc12g056460.3.1	SOC1, AGL20,...	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
Spa_g12045	GL19, AGL19	MADS/AGL-type transcription factor & original description: none	0.12	OrthoFinder output from all 47 species
Spa_g16602	AGL16	MADS/AGL-type transcription factor & original description: none	0.09	OrthoFinder output from all 47 species
Spa_g23073	AGL6	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g26227	STK, AGL11	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e012024_P001	AGL4, SEP2,...	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
Zm00001e015447_P001	AGL6, Zm00001e015447	transcription factor (MADS/AGL)	0.07	OrthoFinder output from all 47 species
Zm00001e039774_P001	SHP2, AGL5,...	transcription factor (MADS/AGL)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0046983	protein dimerization activity	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002100	TF_MADSbox	10	57
IPR002487	TF_Kbox	87	169

External Links

No external refs found!

Ceric.33G065500.1 (AGL13, Ceric.33G065500)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation