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  5. Ceric.33G048800.1

Ceric.33G048800.1 (Ceric.33G048800)


Aliases : Ceric.33G048800

Description : component *(uL24c) of large plastid ribosomal-subunit proteome & original description: pacid=50607372 polypeptide=Ceric.33G048800.1.p locus=Ceric.33G048800 ID=Ceric.33G048800.1.v2.1 annot-version=v2.1


Gene families : OG0006569 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006569_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.33G048800.1
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00098p00115780 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
AT5G54600 No alias Translation protein SH3-like family protein 0.24 OrthoFinder output from all 47 species
Adi_g019582 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Als_g04734 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Aop_g00183 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Azfi_s0006.g010426 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.15 OrthoFinder output from all 47 species
Cre16.g652550 No alias Protein biosynthesis.organelle translation... 0.2 OrthoFinder output from all 47 species
Dac_g00331 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Dcu_g00516 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Dde_g05722 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ehy_g22263 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
GSVIVT01014572001 No alias Protein biosynthesis.organelle translation... 0.09 OrthoFinder output from all 47 species
Gb_13209 No alias 50S ribosomal protein L24, chloroplastic OS=Spinacia... 0.06 OrthoFinder output from all 47 species
LOC_Os06g46930.1 LOC_Os06g46930 component psRPL24 of large ribosomal subunit proteome 0.22 OrthoFinder output from all 47 species
Len_g05147 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Lfl_g05272 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Mp3g07850.1 No alias component psRPL24 of large ribosomal subunit proteome 0.27 OrthoFinder output from all 47 species
Msp_g18519 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Nbi_g00588 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.11 OrthoFinder output from all 47 species
Pir_g07148 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Pp3c15_17530V3.1 Pp3c15_17530 Translation protein SH3-like family protein 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0071.g016787 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.14 OrthoFinder output from all 47 species
Sam_g08486 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Sam_g08487 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.1 OrthoFinder output from all 47 species
Smo230291 No alias Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
Solyc07g063960.3.1 Solyc07g063960 component psRPL24 of large ribosomal subunit proteome 0.22 OrthoFinder output from all 47 species
Spa_g00224 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Tin_g02402 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Zm00001e013043_P001 Zm00001e013043 component psRPL24 of large ribosomal subunit proteome 0.18 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0060590 ATPase regulator activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0070567 cytidylyltransferase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003256 Ribosomal_L24 117 180
IPR005824 KOW 84 115
No external refs found!