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  5. Ceric.33G026000.1

Ceric.33G026000.1 (Ceric.33G026000)


Aliases : Ceric.33G026000

Description : not classified & original description: pacid=50607594 polypeptide=Ceric.33G026000.1.p locus=Ceric.33G026000 ID=Ceric.33G026000.1.v2.1 annot-version=v2.1


Gene families : OG0001497 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001497_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.33G026000.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00270600 evm_27.TU.AmTr_v1... 30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.04 OrthoFinder output from all 47 species
AMTR_s00017p00234440 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
Adi_g075755 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g06965 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21138 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21139 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g32208 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g41657 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0162.g054145 No alias not classified & original description: CDS=1-1809 0.03 OrthoFinder output from all 47 species
Cba_g10413 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g36170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20118 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g47761 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01022281001 No alias 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris 0.04 OrthoFinder output from all 47 species
GSVIVT01023998001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os03g05830.1 LOC_Os03g05830 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os10g30370.1 LOC_Os10g30370 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g18833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g58331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g34973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430689g0020 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Mp7g19710.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g07209 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15339 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g25040 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13992 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc11g005170.2.1 Solyc11g005170 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Spa_g10142 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004710_P005 Zm00001e004710 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e038994_P002 Zm00001e038994 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR029123 RBM39_linker 415 526
IPR000504 RRM_dom 324 395
IPR000504 RRM_dom 229 287
No external refs found!