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  5. Ceric.32G074800.1

Ceric.32G074800.1 (Ceric.32G074800)


Aliases : Ceric.32G074800

Description : regulatory component *(KTN80) of Katanin ATP-dependent microtubule severing complex & original description: pacid=50597851 polypeptide=Ceric.32G074800.1.p locus=Ceric.32G074800 ID=Ceric.32G074800.1.v2.1 annot-version=v2.1


Gene families : OG0003183 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003183_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.32G074800.1

Target Alias Description ECC score Gene Family Method Actions
AT5G08390 No alias Transducin/WD40 repeat-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g061125 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os04g58130.1 LOC_Os04g58130 regulatory component of Katanin ATP-dependent... 0.03 OrthoFinder output from all 47 species
MA_97731g0010 No alias regulatory component of Katanin ATP-dependent... 0.02 OrthoFinder output from all 47 species
Mp3g07080.1 No alias regulatory component of Katanin ATP-dependent... 0.03 OrthoFinder output from all 47 species
Sam_g36727 No alias regulatory component *(KTN80) of Katanin ATP-dependent... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008017 microtubule binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR028021 Katanin_C-terminal 661 818
IPR001680 WD40_repeat 113 149
IPR001680 WD40_repeat 155 191
IPR001680 WD40_repeat 72 107
IPR001680 WD40_repeat 29 64
IPR001680 WD40_repeat 195 233
No external refs found!