Aliases : TTN8, ATSMC1, SMC1, Ceric.32G063300
Description : component *(SMC1/TTN8) of cohesin regulator complex & original description: pacid=50597258 polypeptide=Ceric.32G063300.1.p locus=Ceric.32G063300 ID=Ceric.32G063300.1.v2.1 annot-version=v2.1
Gene families : OG0004293 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004293_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00047p00208430 | TTN8, ATSMC1,... | Cell cycle.mitosis and meiosis.sister chromatid... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00047p00208850 | TTN8, ATSMC1,... | Cell cycle.mitosis and meiosis.sister chromatid... | 0.05 | OrthoFinder output from all 47 species | |
AT3G54670 | TTN8, ATSMC1, SMC1 | Structural maintenance of chromosomes (SMC) family protein | 0.06 | OrthoFinder output from all 47 species | |
Adi_g010815 | TTN8, ATSMC1, SMC1 | component *(SMC1/TTN8) of cohesin regulator complex &... | 0.06 | OrthoFinder output from all 47 species | |
Ala_g02668 | TTN8, ATSMC1, SMC1 | component *(SMC1/TTN8) of cohesin regulator complex &... | 0.07 | OrthoFinder output from all 47 species | |
Als_g01964 | TTN8, ATSMC1, SMC1 | component *(SMC1/TTN8) of cohesin regulator complex &... | 0.08 | OrthoFinder output from all 47 species | |
Aob_g04491 | TTN8, ATSMC1, SMC1 | component *(SMC1/TTN8) of cohesin regulator complex &... | 0.12 | OrthoFinder output from all 47 species | |
Dcu_g05826 | TTN8, ATSMC1, SMC1 | component *(SMC1/TTN8) of cohesin regulator complex &... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01028343001 | TTN8, ATSMC1, SMC1 | Cell cycle.mitosis and meiosis.sister chromatid... | 0.1 | OrthoFinder output from all 47 species | |
LOC_Os12g44390.1 | TTN8, ATSMC1,... | component SMC1/TTN8 of cohesin regulator complex | 0.05 | OrthoFinder output from all 47 species | |
MA_10429667g0010 | TTN8, ATSMC1, SMC1 | Structural maintenance of chromosomes protein 1... | 0.05 | OrthoFinder output from all 47 species | |
Msp_g15568 | TTN8, ATSMC1, SMC1 | component *(SMC1/TTN8) of cohesin regulator complex &... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g13217 | TTN8, ATSMC1, SMC1 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Ppi_g01407 | TTN8, ATSMC1, SMC1 | component *(SMC1/TTN8) of cohesin regulator complex &... | 0.09 | OrthoFinder output from all 47 species | |
Sam_g07221 | No alias | component *(SMC1/TTN8) of cohesin regulator complex &... | 0.02 | OrthoFinder output from all 47 species | |
Solyc06g083870.3.1 | TTN8, ATSMC1,... | component SMC1/TTN8 of cohesin regulator complex | 0.03 | OrthoFinder output from all 47 species | |
Spa_g10305 | TTN8, ATSMC1, SMC1 | component *(SMC1/TTN8) of cohesin regulator complex &... | 0.07 | OrthoFinder output from all 47 species | |
Tin_g02901 | TTN8, ATSMC1, SMC1 | component *(SMC1/TTN8) of cohesin regulator complex &... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e003843_P001 | TTN8, ATSMC1,... | component SMC1/TTN8 of cohesin regulator complex | 0.06 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
CC | GO:0005694 | chromosome | IEA | Interproscan |
BP | GO:0051276 | chromosome organization | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
MF | GO:0003917 | DNA topoisomerase type I (single strand cut, ATP-independent) activity | IEP | HCCA |
MF | GO:0004402 | histone acetyltransferase activity | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006265 | DNA topological change | IEP | HCCA |
BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0006473 | protein acetylation | IEP | HCCA |
BP | GO:0006475 | internal protein amino acid acetylation | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
MF | GO:0008080 | N-acetyltransferase activity | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
BP | GO:0008380 | RNA splicing | IEP | HCCA |
BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
MF | GO:0016410 | N-acyltransferase activity | IEP | HCCA |
BP | GO:0016570 | histone modification | IEP | HCCA |
BP | GO:0016573 | histone acetylation | IEP | HCCA |
MF | GO:0017069 | snRNA binding | IEP | HCCA |
MF | GO:0017070 | U6 snRNA binding | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | HCCA |
BP | GO:0018394 | peptidyl-lysine acetylation | IEP | HCCA |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
MF | GO:0030623 | U5 snRNA binding | IEP | HCCA |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0043543 | protein acylation | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | HCCA |
BP | GO:0071103 | DNA conformation change | IEP | HCCA |
BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No external refs found! |