Ceric.31G015700.1 (TMO6, Ceric.31G015700)

Aliases : TMO6, Ceric.31G015700

Description : transcription factor *(DOF) & original description: pacid=50574135 polypeptide=Ceric.31G015700.1.p locus=Ceric.31G015700 ID=Ceric.31G015700.1.v2.1 annot-version=v2.1

Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.31G015700.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00012p00176640	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
AT1G47655	No alias	Dof-type zinc finger DNA-binding family protein	0.03	OrthoFinder output from all 47 species
AT2G37590	DOF2.4, ATDOF2.4	DNA binding with one finger 2.4	0.04	OrthoFinder output from all 47 species
AT5G65590	No alias	Dof-type zinc finger DNA-binding family protein	0.03	OrthoFinder output from all 47 species
Adi_g016055	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g01888	CDF3	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g11555	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g22545	CDF3	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Als_g39186	No alias	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g18797	OBP3	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene34893.t1	OBP4, Aspi01Gene34893	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s1074.g096912	TMO6	transcription factor *(DOF) & original description: CDS=1-1176	0.03	OrthoFinder output from all 47 species
Dac_g07953	TMO6	transcription factor *(DOF) & original description: none	0.05	OrthoFinder output from all 47 species
Dac_g43968	TMO6	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g07485	OBP4	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g31456	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g10677	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g12722	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01003947001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
GSVIVT01019619001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
LOC_Os02g15350.1	LOC_Os02g15350	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os02g49440.1	ADOF1, DOF1,...	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os03g16850.1	OBP3, LOC_Os03g16850	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os04g47990.1	LOC_Os04g47990	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
LOC_Os05g02150.1	OBP3, LOC_Os05g02150	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os12g38200.1	LOC_Os12g38200	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Ore_g05846	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g26476	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g03743	ADOF1, DOF1	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g17795	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g008984	No alias	transcription factor *(DOF) & original description: CDS=332-1984	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012351	ADOF1, DOF1	transcription factor *(DOF) & original description: CDS=1-1632	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012870	TMO6	transcription factor *(DOF) & original description: CDS=1-1464	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013517	CDF3	transcription factor *(DOF) & original description: CDS=154-1659	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020125	No alias	transcription factor *(DOF) & original description: CDS=124-2595	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0148.g023228	No alias	transcription factor *(DOF) & original description: CDS=1-1353	0.04	OrthoFinder output from all 47 species
Sam_g50082	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Solyc04g070960.3.1	Solyc04g070960	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Solyc06g150130.1.1	OBP4, Solyc06g150130	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Solyc11g010940.2.1	Solyc11g010940	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Spa_g07056	TMO6	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g23610	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e019172_P001	Zm00001e019172	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e031750_P001	Zm00001e031750	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	76	132

External Links

No external refs found!

Ceric.31G015700.1 (TMO6, Ceric.31G015700)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation