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  5. Ceric.31G008400.1

Ceric.31G008400.1 (Ceric.31G008400)


Aliases : Ceric.31G008400

Description : subgroup ARR-B transcription factor & original description: pacid=50574830 polypeptide=Ceric.31G008400.1.p locus=Ceric.31G008400 ID=Ceric.31G008400.1.v2.1 annot-version=v2.1


Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.31G008400.1
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00176p00045260 ARR1, RR1,... RNA biosynthesis.transcriptional activation.ARR-B... 0.04 OrthoFinder output from all 47 species
AT2G40970 MYBC1 Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g06631 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Ala_g02179 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g06717 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36651.t1 ARR1, RR1,... subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69302.t1 LUX, PCL1,... component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Cba_g13893 ARR11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g59744 RR14, ARR14 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.17G049600.1 LUX, PCL1,... component *(LUX) of circadian clock Evening complex (EC)... 0.04 OrthoFinder output from all 47 species
Cre02.g083750 LUX, PCL1 Transcription factor BOA OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g18566 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g38324 RR14, ARR14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10192 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g08391 LUX, PCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14477 RR14, ARR14 not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01011650001 ARR1, RR1 RNA biosynthesis.transcriptional activation.ARR-B... 0.03 OrthoFinder output from all 47 species
GSVIVT01025785001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01035051001 ARR1, RR1 RNA biosynthesis.transcriptional activation.ARR-B... 0.05 OrthoFinder output from all 47 species
Gb_15501 ARR1, RR1 B-type cytokinin ARR response activator. transcription... 0.03 OrthoFinder output from all 47 species
Gb_37200 ARR1, RR1 B-type cytokinin ARR response activator. transcription... 0.03 OrthoFinder output from all 47 species
LOC_Os01g74020.1 LUX, PCL1, LOC_Os01g74020 component LUX of circadian clock Evening complex (EC) 0.03 OrthoFinder output from all 47 species
Lfl_g08772 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28555 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_83273g0010 ARR1, RR1 B-type cytokinin ARR response activator. transcription... 0.03 OrthoFinder output from all 47 species
Mp4g21220.1 LUX, PCL1 component LUX of circadian clock Evening complex (EC) 0.05 OrthoFinder output from all 47 species
Msp_g15114 MYBC1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g15649 ARR11 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g21083 ARR11 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g25181 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26540 ARR11 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08589 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g09918 MYBC1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g02155 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g20473 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.04 OrthoFinder output from all 47 species
Pnu_g03823 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.05 OrthoFinder output from all 47 species
Ppi_g02280 ARR11 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05219 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11087 ARR11 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0331.g027260 No alias component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Sam_g06470 No alias subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39543 No alias subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g06387 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g18223 ARR11 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e013844_P002 RR12, ARR12,... B-type cytokinin ARR response activator. transcription... 0.03 OrthoFinder output from all 47 species
Zm00001e016123_P001 RR12, ARR12,... B-type cytokinin ARR response activator. transcription... 0.05 OrthoFinder output from all 47 species
Zm00001e018507_P001 LUX, PCL1, Zm00001e018507 component LUX of circadian clock Evening complex (EC) 0.02 OrthoFinder output from all 47 species
Zm00001e036325_P002 RR12, ARR12,... B-type cytokinin ARR response activator. transcription... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 170 218
No external refs found!