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  5. Ehy_g01710

Ehy_g01710 (THO2, AtTHO2)


Aliases : THO2, AtTHO2

Description : component *(THOC2/Tho2) of mRNP trafficking THO subcomplex & original description: none


Gene families : OG0003635 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003635_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g01710
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AT1G24706 THO2, AtTHO2 THO2 0.03 OrthoFinder output from all 47 species
Adi_g107430 THO2, AtTHO2 component *(THOC2/Tho2) of mRNP trafficking THO... 0.02 OrthoFinder output from all 47 species
Als_g01214 THO2, AtTHO2 component *(THOC2/Tho2) of mRNP trafficking THO... 0.02 OrthoFinder output from all 47 species
Aob_g29810 THO2, AtTHO2 component *(THOC2/Tho2) of mRNP trafficking THO... 0.03 OrthoFinder output from all 47 species
Ceric.19G073400.1 THO2, AtTHO2,... component *(THOC2/Tho2) of mRNP trafficking THO... 0.03 OrthoFinder output from all 47 species
Cre12.g507700 THO2, AtTHO2 RNA processing.messenger ribonucleoprotein particle... 0.02 OrthoFinder output from all 47 species
Dac_g15531 THO2, AtTHO2 component *(THOC2/Tho2) of mRNP trafficking THO... 0.02 OrthoFinder output from all 47 species
Dcu_g02056 THO2, AtTHO2 component *(THOC2/Tho2) of mRNP trafficking THO... 0.05 OrthoFinder output from all 47 species
LOC_Os01g68810.1 THO2, AtTHO2,... component THOC2/Tho2 of mRNP trafficking THO subcomplex 0.05 OrthoFinder output from all 47 species
Lfl_g04297 THO2, AtTHO2 component *(THOC2/Tho2) of mRNP trafficking THO... 0.03 OrthoFinder output from all 47 species
MA_10430572g0010 THO2, AtTHO2 component THOC2/Tho2 of mRNP trafficking THO subcomplex 0.03 OrthoFinder output from all 47 species
Nbi_g01515 THO2, AtTHO2 component *(THOC2/Tho2) of mRNP trafficking THO... 0.02 OrthoFinder output from all 47 species
Ore_g16129 THO2, AtTHO2 component *(THOC2/Tho2) of mRNP trafficking THO... 0.04 OrthoFinder output from all 47 species
Smo173562 THO2, AtTHO2 RNA processing.messenger ribonucleoprotein particle... 0.03 OrthoFinder output from all 47 species
Solyc05g017890.4.1 THO2, AtTHO2,... component THOC2/Tho2 of mRNP trafficking THO subcomplex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR032302 THOC2_N 69 414
IPR032302 THOC2_N 440 587
IPR021726 THO_THOC2_N 589 664
IPR021418 THO_THOC2_C 918 1212
No external refs found!