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  5. Ceric.30G038800.1

Ceric.30G038800.1 (PSBB, Ceric.30G038800)


Aliases : PSBB, Ceric.30G038800

Description : not classified & original description: pacid=50609266 polypeptide=Ceric.30G038800.1.p locus=Ceric.30G038800 ID=Ceric.30G038800.1.v2.1 annot-version=v2.1


Gene families : OG0004191 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004191_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.30G038800.1
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00585p00000100 PSBB,... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.05 OrthoFinder output from all 47 species
ATCG00680 PSBB photosystem II reaction center protein B 0.11 OrthoFinder output from all 47 species
Adi_g005798 PSBB component *(PsbB/CP47) of PS-II reaction center complex... 0.03 OrthoFinder output from all 47 species
Aev_g08305 PSBB component *(PsbB/CP47) of PS-II reaction center complex... 0.13 OrthoFinder output from all 47 species
Als_g00826 PSBB component *(PsbB/CP47) of PS-II reaction center complex... 0.05 OrthoFinder output from all 47 species
Aob_g02288 PSBB component *(PsbB/CP47) of PS-II reaction center complex... 0.05 OrthoFinder output from all 47 species
Cba_g02603 PSBB component *(PsbB/CP47) of PS-II reaction center complex... 0.05 OrthoFinder output from all 47 species
Ceric.02G013400.1 PSBB, Ceric.02G013400 component *(PsbB/CP47) of PS-II reaction center complex... 0.06 OrthoFinder output from all 47 species
Ceric.02G015500.1 PSBB, Ceric.02G015500 component *(PsbB/CP47) of PS-II reaction center complex... 0.04 OrthoFinder output from all 47 species
Ceric.05G041400.1 PSBB, Ceric.05G041400 component *(PsbB/CP47) of PS-II reaction center complex... 0.12 OrthoFinder output from all 47 species
Ceric.05G051100.1 PSBB, Ceric.05G051100 component *(PsbB/CP47) of PS-II reaction center complex... 0.14 OrthoFinder output from all 47 species
Ceric.19G038500.1 PSBB, Ceric.19G038500 not classified & original description: pacid=50576616... 0.08 OrthoFinder output from all 47 species
Ceric.1Z019400.1 PSBB, Ceric.1Z019400 component *(PsbB/CP47) of PS-II reaction center complex... 0.08 OrthoFinder output from all 47 species
Ceric.1Z021200.1 PSBB, Ceric.1Z021200 component *(PsbB/CP47) of PS-II reaction center complex... 0.11 OrthoFinder output from all 47 species
Ceric.1Z162800.1 PSBB, Ceric.1Z162800 component *(PsbB/CP47) of PS-II reaction center complex... 0.1 OrthoFinder output from all 47 species
Ceric.38G008000.1 PSBB, Ceric.38G008000 component *(PsbB/CP47) of PS-II reaction center complex... 0.12 OrthoFinder output from all 47 species
Dac_g09466 PSBB component *(PsbB/CP47) of PS-II reaction center complex... 0.03 OrthoFinder output from all 47 species
Dcu_g21021 PSBB component *(PsbB/CP47) of PS-II reaction center complex... 0.1 OrthoFinder output from all 47 species
Dde_g03407 PSBB component *(PsbB/CP47) of PS-II reaction center complex... 0.03 OrthoFinder output from all 47 species
GSVIVT01006503001 PSBB Photosystem II CP47 reaction center protein OS=Phaseolus vulgaris 0.04 OrthoFinder output from all 47 species
Gb_23567 PSBB component PsbB/CP47 of PS-II reaction center complex 0.08 OrthoFinder output from all 47 species
Gb_27294 PSBB Photosystem II CP47 reaction center protein OS=Cycas... 0.09 OrthoFinder output from all 47 species
LOC_Os06g39708.1 PSBB, LOC_Os06g39708 component PsbB/CP47 of PS-II reaction center complex 0.14 OrthoFinder output from all 47 species
LOC_Os09g04680.1 PSBB, LOC_Os09g04680 Photosystem II CP47 reaction center protein OS=Oryza... 0.14 OrthoFinder output from all 47 species
LOC_Os10g21310.1 PSBB, LOC_Os10g21310 component PsbB/CP47 of PS-II reaction center complex 0.13 OrthoFinder output from all 47 species
LOC_Os12g10600.1 PSBB, LOC_Os12g10600 Photosystem II CP47 reaction center protein OS=Oryza... 0.03 OrthoFinder output from all 47 species
Lfl_g04892 PSBB component *(PsbB/CP47) of PS-II reaction center complex... 0.17 OrthoFinder output from all 47 species
Mpzg01020.1 PSBB component PsbB/CP47 of PS-II reaction center complex 0.05 OrthoFinder output from all 47 species
Ore_g02100 PSBB component *(PsbB/CP47) of PS-II reaction center complex... 0.06 OrthoFinder output from all 47 species
Pir_g05119 PSBB component *(PsbB/CP47) of PS-II reaction center complex... 0.1 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002254 PSBB not classified & original description: CDS=1-408 0.07 OrthoFinder output from all 47 species
Sam_g10281 No alias component *(PsbB/CP47) of PS-II reaction center complex... 0.03 OrthoFinder output from all 47 species
Smo137729 PSBB Photosystem II CP47 reaction center protein OS=Angiopteris evecta 0.09 OrthoFinder output from all 47 species
Solyc00g500024.1.1 PSBB, Solyc00g500024 component PsbB/CP47 of PS-II reaction center complex 0.09 OrthoFinder output from all 47 species
Solyc00g500071.1.1 PSBB, Solyc00g500071 component PsbB/CP47 of PS-II reaction center complex 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009521 photosystem IEA Interproscan
BP GO:0009767 photosynthetic electron transport chain IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016168 chlorophyll binding IEA Interproscan
BP GO:0019684 photosynthesis, light reaction IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000932 PS_antenna-like 16 196
No external refs found!