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  5. Ceric.30G028200.1

Ceric.30G028200.1 (HIS1-3, Ceric.30G028200)


Aliases : HIS1-3, Ceric.30G028200

Description : linker histone *(H1) & original description: pacid=50609065 polypeptide=Ceric.30G028200.1.p locus=Ceric.30G028200 ID=Ceric.30G028200.1.v2.1 annot-version=v2.1


Gene families : OG0000310 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000310_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.30G028200.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g054553 No alias linker histone *(H1) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07230 HIS1-3 linker histone *(H1) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04604 HIS1-3 linker histone *(H1) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g09311 HIS1-3 linker histone *(H1) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g20176 HIS1-3 linker histone *(H1) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10428517g0010 No alias linker histone (H1) 0.04 OrthoFinder output from all 47 species
Pnu_g08093 HIS1-3 linker histone *(H1) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g09323 HIS1-3 linker histone *(H1) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09324 HIS1-3 linker histone *(H1) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18792 HIS1-3 linker histone *(H1) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g50934 HIS1-3 linker histone *(H1) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006334 nucleosome assembly IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR005818 Histone_H1/H5_H15 38 104
No external refs found!