Ceric.30G027800.1 (GL19, AGL19, Ceric.30G027800)

Aliases : GL19, AGL19, Ceric.30G027800

Description : MADS/AGL-type transcription factor & original description: pacid=50609093 polypeptide=Ceric.30G027800.1.p locus=Ceric.30G027800 ID=Ceric.30G027800.1.v2.1 annot-version=v2.1

Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.30G027800.1

Target	Alias	Description	ECC score	Gene Family Method
Als_g04197	SOC1, AGL20, ATSOC1	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g18795	AGL16	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g25335	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
LOC_Os02g49840.1	AGL16, LOC_Os02g49840	transcription factor (MADS/AGL)	0.04	OrthoFinder output from all 47 species
Len_g30679	SHP2, AGL5	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Len_g38722	AGL1, SHP1	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
MA_347547g0010	SOC1, AGL20, ATSOC1	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
MA_458668g0010	SOC1, AGL20, ATSOC1	transcription factor (MADS/AGL)	0.04	OrthoFinder output from all 47 species
MA_576145g0010	GL19, AGL19	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Pir_g64963	AGL6	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Pp3c16_19170V3.1	AGL61, DIA, Pp3c16_19170	AGAMOUS-like 61	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0050.g013783	STK, AGL11	MADS/AGL-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Sam_g15626	No alias	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g26914	No alias	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g10405	AGL2, SEP1	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g22852	AGL65	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e003670_P002	AGL79, Zm00001e003670	transcription factor (MADS/AGL)	0.05	OrthoFinder output from all 47 species
Zm00001e015728_P001	AGL16, Zm00001e015728	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0046983	protein dimerization activity	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006629	lipid metabolic process	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0016042	lipid catabolic process	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002487	TF_Kbox	89	154
IPR002100	TF_MADSbox	10	57

External Links

No external refs found!

Ceric.30G027800.1 (GL19, AGL19, Ceric.30G027800)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation