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Aliases : GIF3, Ceric.29G051000
Description : cofactor component *(GIF) of GRF-GIF transcriptional complex & original description: pacid=50625311 polypeptide=Ceric.29G051000.1.p locus=Ceric.29G051000 ID=Ceric.29G051000.1.v2.1 annot-version=v2.1
Gene families : OG0001681 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001681_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G01160 | GIF2 | GRF1-interacting factor 2 | 0.04 | OrthoFinder output from all 47 species | |
| AT5G28640 | GIF1, GIF, ATGIF1, AN3 | SSXT family protein | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g01054 | GIF1, GIF, ATGIF1, AN3 | cofactor component *(GIF) of GRF-GIF transcriptional... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0003.g008015 | GIF3 | cofactor component *(GIF) of GRF-GIF transcriptional... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0013.g013241 | GIF3 | cofactor component *(GIF) of GRF-GIF transcriptional... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07380 | GIF3 | cofactor component *(GIF) of GRF-GIF transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g03501 | GIF1, GIF, ATGIF1, AN3 | cofactor component *(GIF) of GRF-GIF transcriptional... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01027418001 | GIF3 | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0014.g006083 | GIF3 | cofactor component *(GIF) of GRF-GIF transcriptional... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g082480.4.1 | GIF3, Solyc03g082480 | cofactor component GIF of GRF-GIF transcriptional complex | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g009820.3.1 | GIF1, GIF,... | cofactor component GIF of GRF-GIF transcriptional complex | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g009280.4.1 | GIF3, Solyc10g009280 | cofactor component GIF of GRF-GIF transcriptional complex | 0.05 | OrthoFinder output from all 47 species | |
| Solyc11g006230.3.1 | GIF1, GIF,... | cofactor component GIF of GRF-GIF transcriptional complex | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e005583_P001 | GIF1, GIF,... | cofactor component GIF of GRF-GIF transcriptional complex | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| BP | GO:0031123 | RNA 3'-end processing | IEP | HCCA |
| BP | GO:0031124 | mRNA 3'-end processing | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007726 | SS18_N | 19 | 75 |
| No external refs found! |