Ehy_g01601

Description : nMAT1/2 type-I mitochondrial RNA splicing factor & original description: none

Gene families : OG0003627 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003627_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ehy_g01601
Cluster	HCCA: Cluster_35

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00133480	evm_27.TU.AmTr_v1...	RNA processing.organelle machineries.RNA...	0.02	OrthoFinder output from all 47 species
Ala_g12839	No alias	nMAT1/2 type-I mitochondrial RNA splicing factor &...	0.02	OrthoFinder output from all 47 species
Als_g01930	No alias	nMAT1/2 type-I mitochondrial RNA splicing factor &...	0.03	OrthoFinder output from all 47 species
Als_g06394	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.09G034500.1	Ceric.09G034500	not classified & original description: pacid=50588493...	0.04	OrthoFinder output from all 47 species
Ceric.16G062100.1	Ceric.16G062100	nMAT1/2 type-I mitochondrial RNA splicing factor &...	0.03	OrthoFinder output from all 47 species
Dcu_g03916	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g12856	No alias	nMAT1/2 type-I mitochondrial RNA splicing factor &...	0.02	OrthoFinder output from all 47 species
LOC_Os10g41790.1	LOC_Os10g41790	nMAT1/2 type-I mitochondrial RNA splicing factor	0.03	OrthoFinder output from all 47 species
Len_g09777	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g18272	No alias	nMAT1/2 type-I mitochondrial RNA splicing factor &...	0.04	OrthoFinder output from all 47 species
MA_52319g0030	No alias	nMAT1/2 type-I mitochondrial RNA splicing factor	0.03	OrthoFinder output from all 47 species
Msp_g39085	No alias	nMAT1/2 type-I mitochondrial RNA splicing factor &...	0.02	OrthoFinder output from all 47 species
Ore_g35993	No alias	nMAT1/2 type-I mitochondrial RNA splicing factor &...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007424	No alias	nMAT1/2 type-I mitochondrial RNA splicing factor &...	0.02	OrthoFinder output from all 47 species
Solyc01g112025.1.1	Solyc01g112025	nMAT1/2 type-I mitochondrial RNA splicing factor	0.04	OrthoFinder output from all 47 species
Solyc08g077385.1.1	Solyc08g077385	nMAT1/2 type-I mitochondrial RNA splicing factor	0.02	OrthoFinder output from all 47 species
Tin_g13211	No alias	nMAT1/2 type-I mitochondrial RNA splicing factor &...	0.04	OrthoFinder output from all 47 species
Tin_g13529	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e000458_P001	Zm00001e000458	nMAT1/2 type-I mitochondrial RNA splicing factor	0.03	OrthoFinder output from all 47 species
Zm00001e011594_P001	Zm00001e011594	nMAT1/2 type-I mitochondrial RNA splicing factor	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006397	mRNA processing	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
BP	GO:0009719	response to endogenous stimulus	IEP	HCCA
BP	GO:0009725	response to hormone	IEP	HCCA
BP	GO:0010033	response to organic substance	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR024937	Domain_X	570	664

External Links

No external refs found!

Ehy_g01601

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation