Aliases : Ceric.28G062700
Description : not classified & original description: pacid=50570794 polypeptide=Ceric.28G062700.1.p locus=Ceric.28G062700 ID=Ceric.28G062700.1.v2.1 annot-version=v2.1
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00014p00090010 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g13600... | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00019p00240430 | OSB3,... | RNA biosynthesis.organelle machineries.RNA polymerase... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00032p00190360 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g13600... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00061p00127300 | MEF22,... | Pentatricopeptide repeat-containing protein At3g12770... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00063p00172440 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00099p00097640 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g39530... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00130p00019530 | DOT4,... | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s03531p00004900 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g02330,... | 0.03 | OrthoFinder output from all 47 species | |
AT1G11290 | CRR22 | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT1G15510 | VAC1, ECB2, ATECB2 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT5G03800 | emb1899, EMB175, EMB166 | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
Adi_g005695 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g007616 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g008563 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g010668 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g034383 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g034437 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g067225 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g067278 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g069059 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g082291 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g101128 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Adi_g113110 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g117974 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g49640 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g06921 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ala_g07993 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g17647 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g22172 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g22292 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ala_g22711 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g25601 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g30723 | REME1 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Ala_g30894 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g32791 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g36528 | CRR22 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Als_g03141 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g06797 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g07162 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g07456 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g08654 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g19094 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Als_g19949 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g21031 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g54594 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aob_g22677 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g24083 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g27256 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aob_g27846 | REME1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aob_g28159 | OTP82 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g37342 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aop_g09609 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g16849 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g18162 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aop_g23985 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g28410 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g28698 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g31523 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g36381 | OSB1 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g70449 | DOT4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene41775.t2 | Aspi01Gene41775 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0002.g001613 | PTAC9, OSB2 | ssDNA-binding protein *(OSB) & original description: CDS=195-1385 | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0008.g011300 | No alias | not classified & original description: CDS=1-2337 | 0.05 | OrthoFinder output from all 47 species | |
Azfi_s0022.g016134 | OTP84 | not classified & original description: CDS=1-2358 | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0022.g016137 | No alias | not classified & original description: CDS=1-1566 | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0045.g029802 | No alias | not classified & original description: CDS=1-2208 | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0058.g034473 | No alias | not classified & original description: CDS=1-2799 | 0.05 | OrthoFinder output from all 47 species | |
Cba_g02684 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g06299 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g07165 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Cba_g07249 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Cba_g07466 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g15323 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Cba_g19903 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g31307 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Cba_g34643 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g37478 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g67849 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ceric.18G072900.1 | Ceric.18G072900 | not classified & original description: pacid=50621906... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.29G060200.1 | Ceric.29G060200 | not classified & original description: pacid=50624987... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.36G058400.1 | Ceric.36G058400 | not classified & original description: pacid=50568396... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g05615 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Dac_g20347 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dac_g21976 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g08906 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g35769 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g47943 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g50144 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g04434 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g04853 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dde_g10498 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dde_g15735 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g15900 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dde_g17623 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g18063 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g19684 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g21331 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g23602 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dde_g25444 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g26933 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g28235 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g38127 | MEF19 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g46553 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01025574001 | No alias | Pentatricopeptide repeat-containing protein At2g37320... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01033389001 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os07g46770.1 | LOC_Os07g46770 | Pentatricopeptide repeat-containing protein At4g21065... | 0.03 | OrthoFinder output from all 47 species | |
Len_g26586 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Len_g54485 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_10429958g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
MA_109134g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
MA_119635g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
MA_179801g0020 | EMB2261 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
MA_55967g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
MA_9463538g0010 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.03 | OrthoFinder output from all 47 species | |
Msp_g03763 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g16921 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Msp_g22779 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g28536 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Msp_g33676 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g34024 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Msp_g34210 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Msp_g34542 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g37164 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Msp_g44674 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g46085 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g43142 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g12962 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g18904 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g20548 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pir_g28397 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pir_g31112 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g12264 | OSB1 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g22601 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g22848 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g04620 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g40980 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g42008 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g52997 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g53730 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g53950 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g53979 | CRR22 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ppi_g57451 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g57817 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g59294 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g59346 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0008.g004036 | OTP84 | not classified & original description: CDS=1-1773 | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0009.g004484 | No alias | not classified & original description: CDS=1-2304 | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0013.g005856 | No alias | not classified & original description: CDS=1-2292 | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0018.g007537 | No alias | not classified & original description: CDS=117-2237 | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0042.g012770 | No alias | not classified & original description: CDS=1-1605 | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0065.g015944 | CRR22 | not classified & original description: CDS=122-4345 | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0144.g022971 | No alias | not classified & original description: CDS=343-1173 | 0.03 | OrthoFinder output from all 47 species | |
Sam_g21461 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g29293 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g29725 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g46501 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Smo75659 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
Solyc05g023900.1.1 | Solyc05g023900 | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
Solyc09g007430.1.1 | PTAC9, OSB2,... | ssDNA-binding protein (OSB). TAC9 cofactor of... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g01102 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g12511 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Spa_g18513 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Spa_g21942 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g22905 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Spa_g26105 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g27470 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g27577 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Spa_g28085 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g49488 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g52254 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Spa_g52415 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g56457 | OTP84 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Spa_g57321 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g11856 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g30032 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Tin_g30037 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Tin_g43830 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e022858_P001 | Zm00001e022858 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e032242_P001 | Zm00001e032242 | Pentatricopeptide repeat-containing protein At1g18485... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e038850_P001 | EMB2758, Zm00001e038850 | Pentatricopeptide repeat-containing protein DOT4,... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e040418_P001 | Zm00001e040418 | Pentatricopeptide repeat-containing protein At3g05340... | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005634 | nucleus | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0008033 | tRNA processing | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 754 | 802 |
IPR002885 | Pentatricopeptide_repeat | 856 | 904 |
IPR002885 | Pentatricopeptide_repeat | 653 | 699 |
IPR002885 | Pentatricopeptide_repeat | 551 | 597 |
IPR002885 | Pentatricopeptide_repeat | 245 | 291 |
IPR002885 | Pentatricopeptide_repeat | 1060 | 1106 |
IPR002885 | Pentatricopeptide_repeat | 142 | 190 |
IPR002885 | Pentatricopeptide_repeat | 449 | 495 |
IPR002885 | Pentatricopeptide_repeat | 348 | 393 |
IPR002885 | Pentatricopeptide_repeat | 1161 | 1208 |
IPR002885 | Pentatricopeptide_repeat | 959 | 1005 |
IPR002885 | Pentatricopeptide_repeat | 321 | 343 |
IPR002885 | Pentatricopeptide_repeat | 1034 | 1056 |
IPR002885 | Pentatricopeptide_repeat | 422 | 444 |
IPR002885 | Pentatricopeptide_repeat | 525 | 547 |
IPR002885 | Pentatricopeptide_repeat | 1237 | 1258 |
No external refs found! |