1. Home
  2. Species
  3. Ceratopteris richardii
  4. Sequence
  5. Ceric.28G050500.1

Ceric.28G050500.1 (CLA, DXS, CLA1, DEF,...)


Aliases : CLA, DXS, CLA1, DEF, DXPS2, Ceric.28G050500

Description : EC_2.2 transferase transferring aldehyde or ketonic group & original description: pacid=50570594 polypeptide=Ceric.28G050500.1.p locus=Ceric.28G050500 ID=Ceric.28G050500.1.v2.1 annot-version=v2.1


Gene families : OG0001325 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001325_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.28G050500.1
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AT4G15560 CLA, DXS, CLA1,... Deoxyxylulose-5-phosphate synthase 0.1 OrthoFinder output from all 47 species
Azfi_s0021.g015690 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.03 OrthoFinder output from all 47 species
Cba_g20839 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.07 OrthoFinder output from all 47 species
Cre07.g356350 CLA, DXS, CLA1,... Secondary metabolism.terpenoids.methylerythritol... 0.05 OrthoFinder output from all 47 species
LOC_Os05g33840.1 CLA, DXS, CLA1,... 1-deoxy-D-xylulose 5-phosphate synthase (DXS) 0.06 OrthoFinder output from all 47 species
Len_g06184 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.03 OrthoFinder output from all 47 species
Mp2g09130.1 CLA, DXS, CLA1,... 1-deoxy-D-xylulose 5-phosphate synthase (DXS) 0.09 OrthoFinder output from all 47 species
Nbi_g08983 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.04 OrthoFinder output from all 47 species
Ore_g43427 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0052.g014067 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.03 OrthoFinder output from all 47 species
Sam_g07986 No alias EC_2.2 transferase transferring aldehyde or ketonic... 0.06 OrthoFinder output from all 47 species
Tin_g19065 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.06 OrthoFinder output from all 47 species
Zm00001e031654_P001 CLA, DXS, CLA1,... 1-deoxy-D-xylulose 5-phosphate synthase (DXS) 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEA Interproscan
BP GO:0016114 terpenoid biosynthetic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR033248 Transketolase_C 576 699
IPR005477 Dxylulose-5-P_synthase 75 360
IPR005475 Transketolase-like_Pyr-bd 398 558
No external refs found!