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  5. Ceric.28G030800.1

Ceric.28G030800.1 (CHMP1A, VPS46.2,...)


Aliases : CHMP1A, VPS46.2, Ceric.28G030800

Description : associated protein of ESCRT-III complex *(VPS46/CHMP1) & original description: pacid=50569873 polypeptide=Ceric.28G030800.1.p locus=Ceric.28G030800 ID=Ceric.28G030800.1.v2.1 annot-version=v2.1


Gene families : OG0001221 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001221_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.28G030800.1

Target Alias Description ECC score Gene Family Method Actions
Aop_g12020 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020554.72 CHMP1B, VPS46.1 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.01 OrthoFinder output from all 47 species
Cre03.g188500 CHMP1A, VPS46.2 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 OrthoFinder output from all 47 species
LOC_Os06g43590.2 CHMP1A, VPS46.2,... VPS46/CHMP1 associated protein of ESCRT-III complex 0.03 OrthoFinder output from all 47 species
Msp_g08498 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.03 OrthoFinder output from all 47 species
Nbi_g29887 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005363 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR005024 Snf7_fam 12 173
No external refs found!