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  5. Ceric.28G019500.1

Ceric.28G019500.1 (VLN4, ATVLN4, Ceric.28G019500)


Aliases : VLN4, ATVLN4, Ceric.28G019500

Description : villin actin-crosslinking factor & original description: pacid=50570654 polypeptide=Ceric.28G019500.1.p locus=Ceric.28G019500 ID=Ceric.28G019500.1.v2.1 annot-version=v2.1


Gene families : OG0000479 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000479_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.28G019500.1
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Adi_g022412 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g107720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0183.g056513 ATVLN2, VLN2 villin actin-crosslinking factor & original description:... 0.03 OrthoFinder output from all 47 species
Pnu_g27621 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
BP GO:0007010 cytoskeleton organization IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR007123 Gelsolin-like_dom 150 214
IPR007123 Gelsolin-like_dom 32 111
IPR007123 Gelsolin-like_dom 400 479
IPR007123 Gelsolin-like_dom 270 302
IPR003128 Villin_headpiece 963 998
No external refs found!