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  5. Ceric.28G015200.1

Ceric.28G015200.1 (APUM2, PUM2, Ceric.28G015200)


Aliases : APUM2, PUM2, Ceric.28G015200

Description : not classified & original description: pacid=50571040 polypeptide=Ceric.28G015200.1.p locus=Ceric.28G015200 ID=Ceric.28G015200.1.v2.1 annot-version=v2.1


Gene families : OG0000583 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000583_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.28G015200.1

Target Alias Description ECC score Gene Family Method Actions
LOC_Os05g01910.1 PUM1, APUM1,... Pumilio homolog 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 920 954
IPR001313 Pumilio_RNA-bd_rpt 847 881
IPR001313 Pumilio_RNA-bd_rpt 703 737
IPR001313 Pumilio_RNA-bd_rpt 741 771
IPR001313 Pumilio_RNA-bd_rpt 886 917
IPR001313 Pumilio_RNA-bd_rpt 966 995
IPR001313 Pumilio_RNA-bd_rpt 817 842
IPR001313 Pumilio_RNA-bd_rpt 775 808
IPR012940 NABP 598 698
No external refs found!