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Aliases : CHB2, SWI3B, ATSWI3B, Ceric.28G011200
Description : SMARCC component *(SWI3) of chromatin remodeling complex & original description: pacid=50570109 polypeptide=Ceric.28G011200.1.p locus=Ceric.28G011200 ID=Ceric.28G011200.1.v2.1 annot-version=v2.1
Gene families : OG0000817 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000817_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G21700 | CHB4, SWI3C, ATSWI3C | SWITCH/sucrose nonfermenting 3C | 0.05 | OrthoFinder output from all 47 species | |
| AT2G33610 | CHB2, SWI3B, ATSWI3B | switch subunit 3 | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g02056 | SWI3A, CHB1, ATSWI3A | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g19082 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g16327 | CHB3, ATSWI3D | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g04333 | SWI3A, CHB1, ATSWI3A | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g08555 | CHB4, SWI3C, ATSWI3C | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g14378 | CHB4, SWI3C, ATSWI3C | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g11402 | CHB4, SWI3C, ATSWI3C | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g15056 | SWI3A, CHB1, ATSWI3A | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01013428001 | CHB2, SWI3B, ATSWI3B | Chromatin organisation.chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_22023 | CHB2, SWI3B, ATSWI3B | component BAF255/170 of chromatin remodeling complex | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os02g10060.1 | CHB2, SWI3B,... | component BAF255/170 of chromatin remodeling complex | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g07730.1 | CHB4, SWI3C,... | component BAF255/170 of chromatin remodeling complex | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g04859 | SWI3A, CHB1, ATSWI3A | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g08236 | CHB3, ATSWI3D | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.03 | OrthoFinder output from all 47 species | |
| Mp8g15610.1 | SWI3A, CHB1, ATSWI3A | component BAF255/170 of chromatin remodeling complex | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g10605 | CHB3, ATSWI3D | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g28434 | CHB4, SWI3C, ATSWI3C | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g01335 | CHB3, ATSWI3D | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0127.g021843 | CHB4, SWI3C, ATSWI3C | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g07213 | No alias | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g07214 | No alias | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g52721 | No alias | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g082760.3.1 | CHB2, SWI3B,... | component BAF255/170 of chromatin remodeling complex | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g06724 | SWI3A, CHB1, ATSWI3A | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e018409_P001 | CHB4, SWI3C,... | component BAF255/170 of chromatin remodeling complex | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e024548_P001 | CHB4, SWI3C,... | component BAF255/170 of chromatin remodeling complex | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000228 | nuclear chromosome | IEP | HCCA |
| MF | GO:0003779 | actin binding | IEP | HCCA |
| CC | GO:0005694 | chromosome | IEP | HCCA |
| BP | GO:0006325 | chromatin organization | IEP | HCCA |
| BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
| CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | HCCA |
| CC | GO:0016592 | mediator complex | IEP | HCCA |
| MF | GO:0019208 | phosphatase regulator activity | IEP | HCCA |
| MF | GO:0019888 | protein phosphatase regulator activity | IEP | HCCA |
| MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
| CC | GO:0030289 | protein phosphatase 4 complex | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| CC | GO:1903293 | phosphatase complex | IEP | HCCA |
| No external refs found! |