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  5. Ceric.28G004500.1

Ceric.28G004500.1 (CRM3, HCF152, Ceric.28G004500)


Aliases : CRM3, HCF152, Ceric.28G004500

Description : plastidial transcript stability factor *(HCF152) & original description: pacid=50570206 polypeptide=Ceric.28G004500.1.p locus=Ceric.28G004500 ID=Ceric.28G004500.1.v2.1 annot-version=v2.1


Gene families : OG0001501 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001501_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.28G004500.1

Target Alias Description ECC score Gene Family Method Actions
Ala_g09008 CRM3, HCF152 plastidial transcript stability factor *(HCF152) &... 0.05 OrthoFinder output from all 47 species
Cba_g11157 CRM3, HCF152 plastidial transcript stability factor *(HCF152) &... 0.06 OrthoFinder output from all 47 species
Gb_16885 CRM3, HCF152 HCF152 plastidial RNA transcript stability factor 0.05 OrthoFinder output from all 47 species
Nbi_g15156 CRM3, HCF152 plastidial transcript stability factor *(HCF152) &... 0.04 OrthoFinder output from all 47 species
Sam_g12051 No alias plastidial transcript stability factor *(HCF152) &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004366 glycerol-3-phosphate O-acyltransferase activity IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 568 595
IPR002885 Pentatricopeptide_repeat 462 490
IPR002885 Pentatricopeptide_repeat 425 453
IPR002885 Pentatricopeptide_repeat 495 541
IPR002885 Pentatricopeptide_repeat 601 648
IPR002885 Pentatricopeptide_repeat 257 303
No external refs found!