Ceric.27G042700.1 (AGL7, AP1, Ceric.27G042700)

Aliases : AGL7, AP1, Ceric.27G042700

Description : MADS/AGL-type transcription factor & original description: pacid=50604787 polypeptide=Ceric.27G042700.1.p locus=Ceric.27G042700 ID=Ceric.27G042700.1.v2.1 annot-version=v2.1

Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.27G042700.1

Target	Alias	Description	ECC score	Gene Family Method
Aev_g21369	AGL16	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g49430	SHP2, AGL5	MADS/AGL-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Als_g60390	AGL30	MADS/AGL-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene12152.t1	AGL42, Aspi01Gene12152	MADS/AGL-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene59880.t1	AGL65, Aspi01Gene59880	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.14G063000.1	AGL65, Ceric.14G063000	MADS/AGL-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ceric.36G037400.1	ANR1, AGL44,...	MADS/AGL-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Dac_g10173	STK, AGL11	MADS/AGL-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Dac_g12204	GL19, AGL19	MADS/AGL-type transcription factor & original description: none	0.09	OrthoFinder output from all 47 species
LOC_Os03g08754.1	SVP, AGL22,...	transcription factor (MADS/AGL)	0.04	OrthoFinder output from all 47 species
Len_g06858	AGL16	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Len_g41239	AGL8, FUL	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Len_g41287	AGL1, SHP1	MADS/AGL-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
MA_138440g0010	SOC1, AGL20, ATSOC1	transcription factor (MADS/AGL)	0.04	OrthoFinder output from all 47 species
MA_6279308g0010	SOC1, AGL20, ATSOC1	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
Mp4g12490.1	AGL67	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
Msp_g06433	SOC1, AGL20, ATSOC1	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g22917	ANR1, AGL44	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g09567	AGL16	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g07434	AGL16	MADS/AGL-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Ppi_g55983	AGL3, SEP4	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002217	AGL15	MADS/AGL-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003070	AGL14	MADS/AGL-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Sam_g06487	No alias	MADS/AGL-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Sam_g30262	No alias	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Solyc05g015750.3.1	AGL9, SEP3,...	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
Solyc12g056460.3.1	SOC1, AGL20,...	transcription factor (MADS/AGL)	0.05	OrthoFinder output from all 47 species
Spa_g29118	AGL21	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g31312	AGL2, SEP1	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g00452	AGL3, SEP4	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0046983	protein dimerization activity	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002100	TF_MADSbox	46	93
IPR002487	TF_Kbox	150	199

External Links

No external refs found!

Ceric.27G042700.1 (AGL7, AP1, Ceric.27G042700)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation