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  5. Ceric.27G030300.1

Ceric.27G030300.1 (ATDRH1, DRH1, Ceric.27G030300)


Aliases : ATDRH1, DRH1, Ceric.27G030300

Description : not classified & original description: pacid=50605657 polypeptide=Ceric.27G030300.1.p locus=Ceric.27G030300 ID=Ceric.27G030300.1.v2.1 annot-version=v2.1


Gene families : OG0000636 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000636_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.27G030300.1

Target Alias Description ECC score Gene Family Method Actions
AT3G06480 No alias DEAD box RNA helicase family protein 0.06 OrthoFinder output from all 47 species
Adi_g020036 ATDRH1, DRH1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g074120 ATDRH1, DRH1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g42061 ATDRH1, DRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14759 ATDRH1, DRH1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g08745 No alias regulatory RNA helicase *(RH20/RH30) of virus... 0.03 OrthoFinder output from all 47 species
Als_g22206 ATDRH1, DRH1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g33054 ATDRH1, DRH1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g14923 ATDRH1, DRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09685 No alias regulatory RNA helicase *(RH20/RH30) of virus... 0.03 OrthoFinder output from all 47 species
Cba_g09901 No alias regulatory RNA helicase *(RH20/RH30) of virus... 0.04 OrthoFinder output from all 47 species
Cba_g10365 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g12670 No alias regulatory RNA helicase *(RH20/RH30) of virus... 0.04 OrthoFinder output from all 47 species
Dcu_g10540 ATDRH1, DRH1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g41933 No alias regulatory RNA helicase *(RH20/RH30) of virus... 0.03 OrthoFinder output from all 47 species
Ehy_g17995 ATDRH1, DRH1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g20062 ATDRH1, DRH1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01017651001 No alias DEAD-box ATP-dependent RNA helicase 40 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01032442001 ATDRH1, DRH1 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Gb_23629 No alias pre-mRNA splicing regulator (DDX5) 0.03 OrthoFinder output from all 47 species
LOC_Os01g36860.1 ATDRH1, DRH1,... DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
LOC_Os11g46240.1 ATDRH1, DRH1,... DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Len_g14109 ATDRH1, DRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17375 ATDRH1, DRH1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g51090 No alias regulatory RNA helicase *(RH20/RH30) of virus... 0.05 OrthoFinder output from all 47 species
Lfl_g05034 ATDRH1, DRH1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g13618 No alias regulatory RNA helicase *(RH20/RH30) of virus... 0.08 OrthoFinder output from all 47 species
Lfl_g39840 ATDRH1, DRH1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_19015g0010 No alias pre-mRNA splicing regulator (DDX5) 0.05 OrthoFinder output from all 47 species
Mp3g07940.1 No alias pre-mRNA splicing regulator (DDX5) 0.03 OrthoFinder output from all 47 species
Msp_g09160 ATDRH1, DRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g14167 ATDRH1, DRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38769 ATDRH1, DRH1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g02786 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g08678 ATDRH1, DRH1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g19068 No alias regulatory RNA helicase *(RH20/RH30) of virus... 0.06 OrthoFinder output from all 47 species
Pir_g15938 ATDRH1, DRH1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g14840 ATDRH1, DRH1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17193 ATDRH1, DRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g057760.4.1 Solyc01g057760 DEAD-box ATP-dependent RNA helicase 40 OS=Arabidopsis... 0.09 OrthoFinder output from all 47 species
Solyc03g112350.4.1 Solyc03g112350 pre-mRNA splicing regulator (DDX5) 0.03 OrthoFinder output from all 47 species
Spa_g56211 ATDRH1, DRH1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e011376_P001 Zm00001e011376 ATP-dependent RNA helicase-like protein DB10... 0.09 OrthoFinder output from all 47 species
Zm00001e016546_P001 Zm00001e016546 pre-mRNA splicing regulator (DDX5) 0.03 OrthoFinder output from all 47 species
Zm00001e020727_P006 ATDRH1, DRH1,... DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa... 0.07 OrthoFinder output from all 47 species
Zm00001e020972_P005 ATDRH1, DRH1,... DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Zm00001e027719_P003 ATDRH1, DRH1,... DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 357 527
IPR001650 Helicase_C 566 672
IPR001202 WW_dom 19 49
No external refs found!