Solyc07g055860.3.1 (Solyc07g055860.3)


Aliases : Solyc07g055860.3

Description : 29.4 protein.postranslational modification Encodes a phytochrome-specific type 5 serine/threonine protein phosphatase. It dephosphorylates active Pfr-phytochromes. Controls light signal flux by enhancing phytochrome stability and affinity for a signal transducer. The gene is alternately spliced. This variant is an integral membrane protein localized to the ER and nuclear envelope. protein phosphatase 5.2 (PP5.2)


Gene families : OG_01_0006047 (Gene family) Phylogenetic Tree(s): OG0006047_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc07g055860.3.1
Cluster HCCA cluster: Cluster_285

Target Alias Description ECC score Gene Family Method Actions
AT2G42810 PP5, PAPP5, PP5.2 protein phosphatase 5.2 0.03 Gene family
GSVIVT01000823001 No alias 29.4 protein.postranslational modification Encodes a... 0.02 Gene family
MA_10434671g0010 No alias 29.4 protein.postranslational modification Encodes a... 0.03 Gene family
Smo425575 PACid_15405955 No description available 0.03 Gene family
Zm00001d037734 GRMZM2G126435 29.4 protein.postranslational modification Encodes a... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013235 PPP_dom 227 286
IPR001440 TPR_1 83 115
IPR004843 Calcineurin-like_PHP_ApaH 294 487
No external refs found!