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  5. Ehy_g01446

Ehy_g01446


Description : not classified & original description: none


Gene families : OG0004930 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004930_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g01446

Target Alias Description ECC score Gene Family Method Actions
AT4G16390 SVR7 pentatricopeptide (PPR) repeat-containing protein 0.02 OrthoFinder output from all 47 species
Aop_g08499 EMB2750 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0262.g060841 No alias not classified & original description: CDS=82-2085 0.02 OrthoFinder output from all 47 species
Ceric.15G014300.1 Ceric.15G014300 not classified & original description: pacid=50639905... 0.02 OrthoFinder output from all 47 species
Dcu_g17091 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003493001 SVR7 Pentatricopeptide repeat-containing protein At4g16390,... 0.03 OrthoFinder output from all 47 species
Mp1g08510.1 No alias Pentatricopeptide repeat-containing protein At5g46580,... 0.02 OrthoFinder output from all 47 species
Msp_g09352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000850_P001 SVR7, Zm00001e000850 Pentatricopeptide repeat-containing protein ATP4,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004359 glutaminase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
MF GO:0042586 peptide deformylase activity IEP HCCA
BP GO:0042816 vitamin B6 metabolic process IEP HCCA
BP GO:0042819 vitamin B6 biosynthetic process IEP HCCA
BP GO:0042822 pyridoxal phosphate metabolic process IEP HCCA
BP GO:0042823 pyridoxal phosphate biosynthetic process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0046184 aldehyde biosynthetic process IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 167 211
IPR002885 Pentatricopeptide_repeat 378 427
IPR002885 Pentatricopeptide_repeat 454 483
IPR002885 Pentatricopeptide_repeat 242 264
IPR002885 Pentatricopeptide_repeat 296 356
No external refs found!