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  5. Ceric.27G003800.1

Ceric.27G003800.1 (Ceric.27G003800)


Aliases : Ceric.27G003800

Description : not classified & original description: pacid=50605218 polypeptide=Ceric.27G003800.1.p locus=Ceric.27G003800 ID=Ceric.27G003800.1.v2.1 annot-version=v2.1


Gene families : OG0008195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008195_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.27G003800.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00043p00233170 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT4G01270 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
GSVIVT01026963001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_07219 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g39925 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g095090.3.1 Solyc01g095090 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e040267_P001 Zm00001e040267 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 11 59
No external refs found!