Ceric.26G044000.1 (ATGSR1, GLN1;1,...)

Aliases : ATGSR1, GLN1;1, ATGLN1;1, GSR 1, Ceric.26G044000

Description : EC_6.3 ligase forming carbon-nitrogen bond & original description: pacid=50600008 polypeptide=Ceric.26G044000.1.p locus=Ceric.26G044000 ID=Ceric.26G044000.1.v2.1 annot-version=v2.1

Gene families : OG0000646 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000646_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.26G044000.1
Cluster	HCCA: Cluster_126

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00060p00116070	ATGSR1, GLN1;1,...	Nutrient uptake.nitrogen assimilation.ammonium...	0.1	OrthoFinder output from all 47 species
AT5G35630	GS2, ATGSL1, GLN2	glutamine synthetase 2	0.08	OrthoFinder output from all 47 species
Als_g09560	GLN1;4	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.03	OrthoFinder output from all 47 species
Aop_g13429	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.06	OrthoFinder output from all 47 species
Azfi_s0092.g043135	GLN1;4	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.03	OrthoFinder output from all 47 species
Cba_g08502	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.05	OrthoFinder output from all 47 species
Cba_g12544	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.04	OrthoFinder output from all 47 species
Cba_g18994	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021319.42	GLN1.3, ATGSKB6, GLN1;3	Nutrient uptake.nitrogen assimilation.ammonium...	0.02	OrthoFinder output from all 47 species
Dac_g05010	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.11	OrthoFinder output from all 47 species
Dac_g05074	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.11	OrthoFinder output from all 47 species
Dde_g08307	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.14	OrthoFinder output from all 47 species
GSVIVT01017868001	GS2, ATGSL1, GLN2	Nutrient uptake.nitrogen assimilation.ammonium...	0.11	OrthoFinder output from all 47 species
LOC_Os04g56400.1	GS2, ATGSL1,...	plastidial glutamine synthetase (GLN2)	0.06	OrthoFinder output from all 47 species
Len_g22494	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.06	OrthoFinder output from all 47 species
Lfl_g07274	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.1	OrthoFinder output from all 47 species
Mp1g24330.1	GLN1.3, ATGSKB6, GLN1;3	Glutamine synthetase, chloroplastic OS=Chlamydomonas...	0.11	OrthoFinder output from all 47 species
Msp_g09593	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.03	OrthoFinder output from all 47 species
Nbi_g17432	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.03	OrthoFinder output from all 47 species
Pir_g13405	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.05	OrthoFinder output from all 47 species
Pnu_g27484	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.03	OrthoFinder output from all 47 species
Pp3c20_22820V3.1	GS2, ATGSL1,...	glutamine synthetase 2	0.04	OrthoFinder output from all 47 species
Ppi_g09418	ATGSR2, GLN1;2, GSR2	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0156.g023640	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.06	OrthoFinder output from all 47 species
Sam_g16445	No alias	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.08	OrthoFinder output from all 47 species
Solyc01g080280.3.1	GS2, ATGSL1,...	plastidial glutamine synthetase (GLN2)	0.12	OrthoFinder output from all 47 species
Spa_g39138	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.03	OrthoFinder output from all 47 species
Tin_g12121	GLN1;4	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004356	glutamate-ammonia ligase activity	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006541	glutamine metabolic process	None	Extended
BP	GO:0006542	glutamine biosynthetic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008652	amino acid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009064	glutamine family amino acid metabolic process	None	Extended
BP	GO:0009084	glutamine family amino acid biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016211	ammonia ligase activity	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	None	Extended
MF	GO:0016880	acid-ammonia (or amide) ligase activity	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007010	cytoskeleton organization	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
BP	GO:0010206	photosystem II repair	IEP	HCCA
BP	GO:0010207	photosystem II assembly	IEP	HCCA
MF	GO:0010277	chlorophyllide a oxygenase [overall] activity	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	HCCA
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
CC	GO:0019898	extrinsic component of membrane	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0030091	protein repair	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR008146	Gln_synth_cat_dom	125	348
IPR008147	Gln_synt_N	21	96

External Links

No external refs found!

Ceric.26G044000.1 (ATGSR1, GLN1;1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation