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  5. Ceric.26G032900.1

Ceric.26G032900.1 (Tudor1, AtTudor1,...)


Aliases : Tudor1, AtTudor1, TSN1, Ceric.26G032900

Description : mRNA endoribonuclease *(TSN) & original description: pacid=50599898 polypeptide=Ceric.26G032900.1.p locus=Ceric.26G032900 ID=Ceric.26G032900.1.v2.1 annot-version=v2.1


Gene families : OG0004117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004117_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.26G032900.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00246090 Tudor1,... RNA processing.messenger ribonucleoprotein particle... 0.04 OrthoFinder output from all 47 species
AT5G07350 Tudor1, AtTudor1, TSN1 TUDOR-SN protein 1 0.09 OrthoFinder output from all 47 species
AT5G61780 TSN2, Tudor2, AtTudor2 TUDOR-SN protein 2 0.03 OrthoFinder output from all 47 species
Aev_g01570 Tudor1, AtTudor1, TSN1 mRNA endoribonuclease *(TSN) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08386 Tudor1, AtTudor1, TSN1 mRNA endoribonuclease *(TSN) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0022.g016015 Tudor1, AtTudor1, TSN1 mRNA endoribonuclease *(TSN) & original description: CDS=1-3189 0.04 OrthoFinder output from all 47 species
Dac_g32549 Tudor1, AtTudor1, TSN1 mRNA endoribonuclease *(TSN) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10478 Tudor1, AtTudor1, TSN1 mRNA endoribonuclease *(TSN) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01005677001 Tudor1, AtTudor1, TSN1 RNA processing.messenger ribonucleoprotein particle... 0.03 OrthoFinder output from all 47 species
Mp2g04260.1 Tudor1, AtTudor1, TSN1 ribonuclease (TSN) 0.06 OrthoFinder output from all 47 species
Smo165776 Tudor1, AtTudor1, TSN1 RNA processing.messenger ribonucleoprotein particle... 0.03 OrthoFinder output from all 47 species
Solyc03g118020.3.1 Tudor1,... ribonuclease (TSN) 0.04 OrthoFinder output from all 47 species
Spa_g30934 Tudor1, AtTudor1, TSN1 mRNA endoribonuclease *(TSN) & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0070006 metalloaminopeptidase activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002999 Tudor 737 858
IPR016071 Staphylococal_nuclease_OB-fold 35 143
IPR016071 Staphylococal_nuclease_OB-fold 620 718
IPR016071 Staphylococal_nuclease_OB-fold 265 360
No external refs found!