1. Home
  2. Species
  3. Equisetum hyemale
  4. Sequence
  5. Ehy_g01378

Ehy_g01378


Description : substrate adaptor *(RAE1) of SCF E3 ubiquitin ligase complex & original description: none


Gene families : OG0002069 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002069_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g01378

Target Alias Description ECC score Gene Family Method Actions
Aop_g06998 No alias substrate adaptor *(RAE1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ceric.10G006900.1 Ceric.10G006900 substrate adaptor *(RAE1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Dcu_g12317 No alias substrate adaptor *(RAE1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Dde_g16820 No alias substrate adaptor *(RAE1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Gb_24899 No alias F-box/LRR-repeat protein 3 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Gb_39800 No alias F-box/LRR-repeat protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os12g36670.1 LOC_Os12g36670 F-box/LRR-repeat protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pir_g39374 No alias substrate adaptor *(RAE1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Solyc10g076290.2.1 Solyc10g076290 F-box/LRR-repeat protein 3 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Tin_g13446 No alias substrate adaptor *(RAE1) of SCF E3 ubiquiTin ligase... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0003951 NAD+ kinase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006739 NADP metabolic process IEP HCCA
BP GO:0006741 NADP biosynthetic process IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019363 pyridine nucleotide biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 317 340
IPR001611 Leu-rich_rpt 522 544
IPR001611 Leu-rich_rpt 496 519
IPR001611 Leu-rich_rpt 368 390
IPR001611 Leu-rich_rpt 215 234
IPR001611 Leu-rich_rpt 187 210
No external refs found!