Aliases : SRS1, STY1, Ceric.25G035200
Description : SRS-type transcription factor & original description: pacid=50593723 polypeptide=Ceric.25G035200.1.p locus=Ceric.25G035200 ID=Ceric.25G035200.1.v2.1 annot-version=v2.1
Gene families : OG0001235 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001235_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ceric.25G035200.1 | |
Cluster | HCCA: Cluster_78 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00001p00223800 | SHI,... | RNA biosynthesis.transcriptional activation.SRS... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00063p00161200 | LRP1,... | RNA biosynthesis.transcriptional activation.SRS... | 0.03 | OrthoFinder output from all 47 species | |
AT2G18120 | SRS4 | SHI-related sequence 4 | 0.05 | OrthoFinder output from all 47 species | |
AT4G36260 | SRS2, STY2 | Lateral root primordium (LRP) protein-related | 0.04 | OrthoFinder output from all 47 species | |
AT5G12330 | LRP1 | Lateral root primordium (LRP) protein-related | 0.06 | OrthoFinder output from all 47 species | |
Adi_g058361 | SHI | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g058362 | SHI | SRS-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Adi_g061023 | SHI | SRS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Adi_g077130 | SRS1, STY1 | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g079599 | SRS1, STY1 | SRS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Adi_g079607 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Adi_g085909 | SRS1, STY1 | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g106034 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g46734 | SRS7 | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aob_g23682 | SRS1, STY1 | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0065.g035783 | SHI | SRS-type transcription factor & original description: CDS=1-2148 | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0092.g043005 | SRS5 | SRS-type transcription factor & original description: CDS=39-1118 | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0861.g090073 | SHI | SRS-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.02G095600.1 | SHI, Ceric.02G095600 | SRS-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g40676 | SHI | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01009812001 | SRS5 | RNA biosynthesis.transcriptional activation.SRS... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01024206001 | SHI | RNA biosynthesis.transcriptional activation.SRS... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os01g72490.1 | LRP1, LOC_Os01g72490 | transcription factor (SRS) | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os05g32070.1 | LRP1, LOC_Os05g32070 | transcription factor (SRS) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os08g43410.1 | SRS1, STY1,... | transcription factor (SRS) | 0.04 | OrthoFinder output from all 47 species | |
Len_g33081 | SHI | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g18740 | SHI | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g25627 | SHI | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g32454 | LRP1 | SRS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
MA_2299g0010 | LRP1 | transcription factor (SRS) | 0.05 | OrthoFinder output from all 47 species | |
Mp3g19510.1 | SHI | transcription factor (SRS) | 0.03 | OrthoFinder output from all 47 species | |
Msp_g32314 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g26494 | SHI | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0017.g007215 | SHI | SRS-type transcription factor & original description: CDS=1-2160 | 0.05 | OrthoFinder output from all 47 species | |
Solyc02g084680.3.1 | SRS1, STY1,... | transcription factor (SRS) | 0.04 | OrthoFinder output from all 47 species | |
Solyc10g054070.1.1 | SRS5, Solyc10g054070 | transcription factor (SRS) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e004006_P001 | SHI, Zm00001e004006 | transcription factor (SRS) | 0.07 | OrthoFinder output from all 47 species | |
Zm00001e010227_P001 | SRS1, STY1,... | transcription factor (SRS) | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e013256_P002 | SHI, Zm00001e013256 | transcription factor (SRS) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e024681_P001 | SHI, Zm00001e024681 | transcription factor (SRS) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e026854_P001 | SHI, Zm00001e026854 | transcription factor (SRS) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e028304_P001 | LRP1, Zm00001e028304 | transcription factor (SRS) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e030189_P001 | SHI, Zm00001e030189 | transcription factor (SRS) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e031567_P001 | LRP1, Zm00001e031567 | transcription factor (SRS) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e034798_P001 | SRS1, STY1,... | transcription factor (SRS) | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |