1. Home
  2. Species
  3. Ceratopteris richardii
  4. Sequence
  5. Ceric.25G035000.1

Ceric.25G035000.1 (HTA7, Ceric.25G035000)


Aliases : HTA7, Ceric.25G035000

Description : histone *(H2A) & original description: pacid=50593123 polypeptide=Ceric.25G035000.1.p locus=Ceric.25G035000 ID=Ceric.25G035000.1.v2.1 annot-version=v2.1


Gene families : OG0000117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.25G035000.1
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
Adi_g019584 HTA6 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g11673 GAMMA-H2AX,... histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0102.g044568 HTA6 histone *(H2A) & original description: CDS=1-438 0.03 OrthoFinder output from all 47 species
Azfi_s0678.g081837 HTA10 histone *(H2A) & original description: CDS=127-525 0.03 OrthoFinder output from all 47 species
Cre17.g714100 HTA10 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Ehy_g10226 GAMMA-H2AX,... histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
MA_169054g0020 HTA10 histone (H2A) 0.02 OrthoFinder output from all 47 species
Ore_g08324 HTA6 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g21304 HTA7 histone *(H2A) & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g29875 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65929 HTA13 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62733 HTA7 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g005220.4.1 GAMMA-H2AX,... histone (H2A) 0.02 OrthoFinder output from all 47 species
Spa_g48382 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 17 92
IPR032454 Histone_H2A_C 96 129
No external refs found!