Ceric.25G021000.1 (GAD, GAD1, Ceric.25G021000)

Aliases : GAD, GAD1, Ceric.25G021000

Description : glutamate decarboxylase *(GAD) & original description: pacid=50593851 polypeptide=Ceric.25G021000.1.p locus=Ceric.25G021000 ID=Ceric.25G021000.1.v2.1 annot-version=v2.1

Gene families : OG0000690 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000690_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.25G021000.1
Cluster	HCCA: Cluster_6

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00024p00144920	GAD5,...	Glutamate decarboxylase 5 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AMTR_s00024p00145270	GAD, GAD1,...	Amino acid metabolism.biosynthesis.glutamate...	0.03	OrthoFinder output from all 47 species
AT5G17330	GAD, GAD1	glutamate decarboxylase	0.04	OrthoFinder output from all 47 species
Adi_g074621	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g01082	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g09604	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g20597	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g18805	GAD4	glutamate decarboxylase *(GAD) & original description: none	0.1	OrthoFinder output from all 47 species
Als_g01711	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g63120	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene69536.t1	GAD, GAD1,...	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g48842	GAD, GAD1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g03311	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g01418	GAD4	glutamate decarboxylase *(GAD) & original description: none	0.14	OrthoFinder output from all 47 species
Dcu_g10197	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.14	OrthoFinder output from all 47 species
Dde_g10779	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g15377	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os04g37460.1	GAD, GAD1, LOC_Os04g37460	glutamate decarboxylase	0.02	OrthoFinder output from all 47 species
Len_g08076	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.04	OrthoFinder output from all 47 species
Len_g20416	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Len_g28758	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
MA_102154g0010	GAD, GAD1	Glutamate decarboxylase 4 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_1610g0010	GAD4	glutamate decarboxylase	0.02	OrthoFinder output from all 47 species
MA_65512g0010	GAD3	Glutamate decarboxylase OS=Petunia hybrida...	0.04	OrthoFinder output from all 47 species
Nbi_g09361	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g06503	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g08445	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g30214	GAD4	glutamate decarboxylase *(GAD) & original description: none	0.11	OrthoFinder output from all 47 species
Sam_g38516	No alias	glutamate decarboxylase *(GAD) & original description: none	0.06	OrthoFinder output from all 47 species
Solyc04g025530.3.1	GAD4, Solyc04g025530	glutamate decarboxylase	0.03	OrthoFinder output from all 47 species
Solyc05g054050.4.1	GAD, GAD1, Solyc05g054050	glutamate decarboxylase	0.02	OrthoFinder output from all 47 species
Spa_g12090	GAD4	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g39438	GAD2	glutamate decarboxylase *(GAD) & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g55008	GAD2	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g06998	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e007980_P003	GAD2, Zm00001e007980	glutamate decarboxylase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	IEA	Interproscan
MF	GO:0019842	vitamin binding	None	Extended
MF	GO:0030170	pyridoxal phosphate binding	IEA	Interproscan
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
MF	GO:0070279	vitamin B6 binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005384	manganese ion transmembrane transporter activity	IEP	HCCA
BP	GO:0006873	cellular monoatomic ion homeostasis	IEP	HCCA
BP	GO:0006875	cellular metal ion homeostasis	IEP	HCCA
BP	GO:0019725	cellular homeostasis	IEP	HCCA
BP	GO:0030003	cellular monoatomic cation homeostasis	IEP	HCCA
BP	GO:0030026	cellular manganese ion homeostasis	IEP	HCCA
MF	GO:0030247	polysaccharide binding	IEP	HCCA
BP	GO:0042592	homeostatic process	IEP	HCCA
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	HCCA
BP	GO:0046916	cellular transition metal ion homeostasis	IEP	HCCA
BP	GO:0048878	chemical homeostasis	IEP	HCCA
BP	GO:0050801	monoatomic ion homeostasis	IEP	HCCA
BP	GO:0055065	metal ion homeostasis	IEP	HCCA
BP	GO:0055071	manganese ion homeostasis	IEP	HCCA
BP	GO:0055076	transition metal ion homeostasis	IEP	HCCA
BP	GO:0055080	monoatomic cation homeostasis	IEP	HCCA
BP	GO:0055082	cellular chemical homeostasis	IEP	HCCA
BP	GO:0098771	inorganic ion homeostasis	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002129	PyrdxlP-dep_de-COase	3	344

External Links

No external refs found!

Ceric.25G021000.1 (GAD, GAD1, Ceric.25G021000)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation