1. Home
  2. Species
  3. Ceratopteris richardii
  4. Sequence
  5. Ceric.24G077100.1

Ceric.24G077100.1 (ATLUP2, LUP2, Ceric.24G077100)


Aliases : ATLUP2, LUP2, Ceric.24G077100

Description : not classified & original description: pacid=50629603 polypeptide=Ceric.24G077100.1.p locus=Ceric.24G077100 ID=Ceric.24G077100.1.v2.1 annot-version=v2.1


Gene families : OG0002047 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002047_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.24G077100.1
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Ala_g28633 ATLUP2, LUP2 squalene-hopene cyclase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g69424 ATLUP2, LUP2 EC_5.4 intramolecular transferase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10453.t1 ATLUP2, LUP2,... squalene-hopene cyclase & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene24548.t1 Aspi01Gene24548 squalene-hopene cyclase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24550.t1 Aspi01Gene24550 squalene-hopene cyclase & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene24551.t1 ATLUP2, LUP2,... squalene-hopene cyclase & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene24552.t1 Aspi01Gene24552 squalene-hopene cyclase & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene36059.t1 ATLUP2, LUP2,... squalene-hopene cyclase & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene36061.t1 Aspi01Gene36061 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene36140.t1 Aspi01Gene36140 squalene-hopene cyclase & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene63178.t1 Aspi01Gene63178 EC_5.4 intramolecular transferase & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene63179.t1 Aspi01Gene63179 EC_5.4 intramolecular transferase & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.24G076600.1 ATLUP2, LUP2,... squalene-hopene cyclase & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.24G076700.1 Ceric.24G076700 not classified & original description: pacid=50628955... 0.04 OrthoFinder output from all 47 species
Lfl_g31905 No alias squalene-hopene cyclase & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g37722 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
InterPro domains Description Start Stop
IPR032696 SQ_cyclase_C 60 162
No external refs found!