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  5. Ceric.24G046500.1

Ceric.24G046500.1 (Ceric.24G046500)


Aliases : Ceric.24G046500

Description : bHLH-type transcription factor & original description: pacid=50629035 polypeptide=Ceric.24G046500.1.p locus=Ceric.24G046500 ID=Ceric.24G046500.1.v2.1 annot-version=v2.1


Gene families : OG0000245 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000245_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.24G046500.1
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
AT5G46830 NIG1, ATNIG1 NACL-inducible gene 1 0.05 OrthoFinder output from all 47 species
Ala_g13949 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14443 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g02690 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Gb_40760 BHLH42, TT8 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
LOC_Os04g47080.1 EGL1, EGL3,... transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Nbi_g13494 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g24060 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c22_2930V3.1 BHLH42, TT8, Pp3c22_2930 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000372 ATMYC2, MYC2,... bHLH-type transcription factor & original description: CDS=1-1683 0.04 OrthoFinder output from all 47 species
Solyc09g065100.3.1 BHLH42, TT8,... transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR025610 MYC/MYB_N 52 235
IPR011598 bHLH_dom 463 509
No external refs found!