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  5. Ceric.24G038500.1

Ceric.24G038500.1 (POLD2, Ceric.24G038500)


Aliases : POLD2, Ceric.24G038500

Description : component *(POLD2) of DNA polymerase delta complex & original description: pacid=50629371 polypeptide=Ceric.24G038500.1.p locus=Ceric.24G038500 ID=Ceric.24G038500.1.v2.1 annot-version=v2.1


Gene families : OG0005379 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005379_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.24G038500.1

Target Alias Description ECC score Gene Family Method Actions
AT2G42120 POLD2 DNA polymerase delta small subunit 0.03 OrthoFinder output from all 47 species
Ala_g28468 POLD2 component *(POLD2) of DNA polymerase delta complex &... 0.03 OrthoFinder output from all 47 species
Cre08.g374050 POLD2 Cell cycle.interphase.DNA replication.elongation.DNA... 0.02 OrthoFinder output from all 47 species
LOC_Os03g03650.1 POLD2, LOC_Os03g03650 component POLD2 of DNA polymerase delta complex 0.06 OrthoFinder output from all 47 species
Lfl_g11480 POLD2 component *(POLD2) of DNA polymerase delta complex &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR007185 DNA_pol_a/d/e_bsu 184 393
IPR040663 DNA_pol_D_N 34 160
No external refs found!