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  5. Ceric.24G012200.1

Ceric.24G012200.1 (ATUBP14, TTN6, PER1,...)


Aliases : ATUBP14, TTN6, PER1, UBP14, Ceric.24G012200

Description : deubiquitinase component *(GID6/UBP14) of GID ubiquitination complex & original description: pacid=50628932 polypeptide=Ceric.24G012200.1.p locus=Ceric.24G012200 ID=Ceric.24G012200.1.v2.1 annot-version=v2.1


Gene families : OG0004796 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004796_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.24G012200.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00072p00067600 ATUBP14, TTN6,... Ubiquitin carboxyl-terminal hydrolase 14 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Aev_g01333 ATUBP14, TTN6,... deubiquitinase component *(GID6/UBP14) of GID... 0.03 OrthoFinder output from all 47 species
Azfi_s0246.g060051 ATUBP14, TTN6,... deubiquitinase component *(GID6/UBP14) of GID... 0.03 OrthoFinder output from all 47 species
Cre02.g080350 ATUBP14, TTN6,... Protein degradation.peptidase families.cysteine-type... 0.02 OrthoFinder output from all 47 species
Dcu_g24349 ATUBP14, TTN6,... deubiquitinase component *(GID6/UBP14) of GID... 0.06 OrthoFinder output from all 47 species
GSVIVT01014465001 ATUBP14, TTN6,... Ubiquitin carboxyl-terminal hydrolase 14 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os01g08200.1 ATUBP14, TTN6,... deubiquitinase (UBP14) 0.03 OrthoFinder output from all 47 species
Lfl_g02058 ATUBP14, TTN6,... deubiquitinase component *(GID6/UBP14) of GID... 0.03 OrthoFinder output from all 47 species
Pir_g00642 ATUBP14, TTN6,... deubiquitinase component *(GID6/UBP14) of GID... 0.03 OrthoFinder output from all 47 species
Ppi_g03215 ATUBP14, TTN6,... deubiquitinase component *(GID6/UBP14) of GID... 0.03 OrthoFinder output from all 47 species
Solyc07g063650.4.1 ATUBP14, TTN6,... deubiquitinase (UBP14) 0.03 OrthoFinder output from all 47 species
Tin_g05210 ATUBP14, TTN6,... deubiquiTinase component *(GID6/UBP14) of GID... 0.05 OrthoFinder output from all 47 species
Zm00001e025902_P001 ATUBP14, TTN6,... deubiquitinase (UBP14) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
BP GO:0016579 protein deubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
CC GO:0034457 Mpp10 complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0043138 3'-5' DNA helicase activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR015940 UBA 693 728
IPR015940 UBA 626 663
IPR001607 Znf_UBP 187 260
IPR041432 UBP13_Znf-UBP_var 18 80
IPR001394 Peptidase_C19_UCH 315 816
No external refs found!