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  5. Ehy_g01171

Ehy_g01171 (LRX1)


Aliases : LRX1

Description : not classified & original description: none


Gene families : OG0000448 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000448_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g01171

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00242570 evm_27.TU.AmTr_v1... Pollen-specific leucine-rich repeat extensin-like... 0.02 OrthoFinder output from all 47 species
AMTR_s00160p00027170 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
AT1G49490 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
AT3G22800 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
AT4G29240 No alias Leucine-rich repeat (LRR) family protein 0.02 OrthoFinder output from all 47 species
AT4G33970 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
Ala_g35632 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03749 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03771 LRX2 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s1965.g108394 No alias not classified & original description: CDS=1-1416 0.04 OrthoFinder output from all 47 species
Dcu_g11931 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04566 LRX2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018025001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
GSVIVT01031702001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_27021 LRX2 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
LOC_Os01g08470.1 LOC_Os01g08470 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
LOC_Os01g41120.1 LOC_Os01g41120 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
LOC_Os03g43650.1 LOC_Os03g43650 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
LOC_Os03g55014.1 LOC_Os03g55014 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g58110.1 LOC_Os03g58110 LRR-domain extensin 0.01 OrthoFinder output from all 47 species
MA_100985g0010 LRX2 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
Msp_g29675 No alias LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g19666 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17890 LRX2 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g012995 LRX2 not classified & original description: CDS=401-2401 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018499 No alias LRR-domain extensin & original description: CDS=1-1542 0.02 OrthoFinder output from all 47 species
Solyc05g026240.3.1 Solyc05g026240 Leucine-rich repeat extensin-like protein 4... 0.06 OrthoFinder output from all 47 species
Solyc07g053840.1.1 Solyc07g053840 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
Spa_g13067 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e017627_P001 LRX2, Zm00001e017627 Pollen-specific leucine-rich repeat extensin-like... 0.02 OrthoFinder output from all 47 species
Zm00001e022985_P003 Zm00001e022985 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Zm00001e026840_P001 Zm00001e026840 LRR-domain extensin 0.04 OrthoFinder output from all 47 species
Zm00001e041184_P001 Zm00001e041184 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004615 phosphomannomutase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009225 nucleotide-sugar metabolic process IEP HCCA
BP GO:0009226 nucleotide-sugar biosynthetic process IEP HCCA
BP GO:0009298 GDP-mannose biosynthetic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019673 GDP-mannose metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 65 97
No external refs found!