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  5. Ceric.23G025200.1

Ceric.23G025200.1 (GLR3.3, ATGLR3.3,...)


Aliases : GLR3.3, ATGLR3.3, Ceric.23G025200

Description : not classified & original description: pacid=50610224 polypeptide=Ceric.23G025200.1.p locus=Ceric.23G025200 ID=Ceric.23G025200.1.v2.1 annot-version=v2.1


Gene families : OG0000075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.23G025200.1
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00178690 GLR2.7,... Solute transport.channels.GLR ligand-gated cation channel 0.04 OrthoFinder output from all 47 species
AMTR_s00019p00180760 GLR2.3,... Solute transport.channels.GLR ligand-gated cation channel 0.03 OrthoFinder output from all 47 species
AT2G32390 ATGLR3.5, GLR6, GLR3.5 glutamate receptor 3.5 0.04 OrthoFinder output from all 47 species
AT5G48400 ATGLR1.2, GLR1.2 Glutamate receptor family protein 0.03 OrthoFinder output from all 47 species
Aev_g13740 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g14271 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g02618 ATGLR3.5, GLR6, GLR3.5 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g28045 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14350 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41861.t1 GLR3.3,... ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene54274.t1 GLR3.3,... ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63331.t1 GLR3.3,... ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63337.t1 GLR3.3,... ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.28G068100.1 GLUR3, GLR3.4,... ligand-gated cation channel *(GLR) & original... 0.03 OrthoFinder output from all 47 species
Dac_g11124 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g26350 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g55769 ATGLR3.5, GLR6, GLR3.5 ligand-gated cation channel *(GLR) & original description: none 0.02 OrthoFinder output from all 47 species
MA_103602g0010 GLR3.3, ATGLR3.3 ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species
MA_10426811g0010 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species
MA_141267g0010 GLR3.3, ATGLR3.3 ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species
MA_3635444g0010 GLR2.7, ATGLR2.7 ligand-gated cation channel (GLR) 0.04 OrthoFinder output from all 47 species
MA_37580g0010 ATGLR3.1, GLR2,... ligand-gated cation channel (GLR) 0.04 OrthoFinder output from all 47 species
MA_9039812g0010 ATGLR3.2,... ligand-gated cation channel (GLR) 0.02 OrthoFinder output from all 47 species
MA_958834g0010 ATGLR3.2,... ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species
MA_9796468g0010 GLR2.7, ATGLR2.7 ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species
Pnu_g13926 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c15_25650V3.1 GLR3.3,... glutamate receptor 3.3 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011008 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original... 0.03 OrthoFinder output from all 47 species
Sam_g28923 No alias ligand-gated cation channel *(GLR) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g063170.3.1 GLR2.8,... ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species
Spa_g08422 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09477 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated monoatomic ion channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR001320 Iontro_rcpt_C 14 119
No external refs found!