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  5. Ceric.23G021200.1

Ceric.23G021200.1 (Ceric.23G021200)


Aliases : Ceric.23G021200

Description : E3 ubiquitin ligase & original description: pacid=50611196 polypeptide=Ceric.23G021200.1.p locus=Ceric.23G021200 ID=Ceric.23G021200.1.v2.1 annot-version=v2.1


Gene families : OG0000370 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.23G021200.1
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
AT4G02075 PIT1 RING/FYVE/PHD zinc finger superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g074839 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03275 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11181 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0591.g078731 No alias not classified & original description: CDS=293-1048 0.04 OrthoFinder output from all 47 species
Cba_g77375 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g01320 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24961 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01028110001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Gb_37740 No alias RING-v-class E3 ligase 0.04 OrthoFinder output from all 47 species
LOC_Os01g49280.1 LOC_Os01g49280 RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os01g66970.1 LOC_Os01g66970 RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os05g28730.1 LOC_Os05g28730 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os11g38800.1 LOC_Os11g38800 RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species
Len_g08617 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56643 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g12114 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18351 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g07989 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g26902 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63845 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000908 No alias E3 ubiquitin ligase & original description: CDS=1-1032 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019260 No alias E3 ubiquitin ligase & original description: CDS=708-1604 0.03 OrthoFinder output from all 47 species
Solyc04g007600.4.1 Solyc04g007600 RING-v-class E3 ligase 0.04 OrthoFinder output from all 47 species
Spa_g06371 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30245 No alias E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g10556 No alias E3 ubiquiTin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e017493_P001 Zm00001e017493 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e026209_P003 Zm00001e026209 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e028572_P001 Zm00001e028572 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
InterPro domains Description Start Stop
IPR022143 DUF3675 117 227
IPR011016 Znf_RING-CH 65 110
No external refs found!