Ceric.22G068600.1 (CDC45, Ceric.22G068600)

Aliases : CDC45, Ceric.22G068600

Description : cell cycle auxiliary factor *(CDC45) & original description: pacid=50613976 polypeptide=Ceric.22G068600.1.p locus=Ceric.22G068600 ID=Ceric.22G068600.1.v2.1 annot-version=v2.1

Gene families : OG0008920 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008920_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.22G068600.1
Cluster	HCCA: Cluster_53

Target	Alias	Description	ECC score	Gene Family Method
AT3G25100	CDC45	cell division cycle 45	0.08	OrthoFinder output from all 47 species
Aop_g04657	CDC45	cell cycle auxiliary factor *(CDC45) & original description: none	0.1	OrthoFinder output from all 47 species
Aspi01Gene50014.t1	CDC45, Aspi01Gene50014	cell cycle auxiliary factor *(CDC45) & original description: none	0.05	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001302.6	No alias	Cell cycle.interphase.DNA replication.initiation.CDC45...	0.05	OrthoFinder output from all 47 species
Cre06.g270250	No alias	Cell cycle.interphase.DNA replication.initiation.CDC45...	0.02	OrthoFinder output from all 47 species
Dcu_g14842	CDC45	cell cycle auxiliary factor *(CDC45) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01000797001	CDC45	Cell cycle.interphase.DNA replication.initiation.CDC45...	0.06	OrthoFinder output from all 47 species
Gb_40696	CDC45	CDC45 cell cycle auxiliary factor	0.1	OrthoFinder output from all 47 species
LOC_Os11g03430.1	CDC45, LOC_Os11g03430	CDC45 cell cycle auxiliary factor	0.07	OrthoFinder output from all 47 species
LOC_Os12g03130.1	CDC45, LOC_Os12g03130	CDC45 cell cycle auxiliary factor	0.09	OrthoFinder output from all 47 species
MA_94094g0010	CDC45	CDC45 cell cycle auxiliary factor	0.09	OrthoFinder output from all 47 species
Mp6g20220.1	CDC45	CDC45 cell cycle auxiliary factor	0.05	OrthoFinder output from all 47 species
Msp_g11586	CDC45	cell cycle auxiliary factor *(CDC45) & original description: none	0.12	OrthoFinder output from all 47 species
Nbi_g09206	CDC45	cell cycle auxiliary factor *(CDC45) & original description: none	0.12	OrthoFinder output from all 47 species
Ppi_g15977	CDC45	cell cycle auxiliary factor *(CDC45) & original description: none	0.05	OrthoFinder output from all 47 species
Solyc09g059440.1.1	CDC45, Solyc09g059440	CDC45 cell cycle auxiliary factor	0.05	OrthoFinder output from all 47 species
Spa_g00437	CDC45	cell cycle auxiliary factor *(CDC45) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g06817	CDC45	cell cycle auxiliary factor *(CDC45) & original description: none	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006270	DNA replication initiation	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
BP	GO:0006275	regulation of DNA replication	IEP	HCCA
BP	GO:0006325	chromatin organization	IEP	HCCA
BP	GO:0006334	nucleosome assembly	IEP	HCCA
BP	GO:0006338	chromatin remodeling	IEP	HCCA
BP	GO:0007034	vacuolar transport	IEP	HCCA
BP	GO:0008608	attachment of spindle microtubules to kinetochore	IEP	HCCA
BP	GO:0009262	deoxyribonucleotide metabolic process	IEP	HCCA
BP	GO:0009263	deoxyribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0022402	cell cycle process	IEP	HCCA
CC	GO:0031262	Ndc80 complex	IEP	HCCA
CC	GO:0032993	protein-DNA complex	IEP	HCCA
BP	GO:0034728	nucleosome organization	IEP	HCCA
CC	GO:0044815	DNA packaging complex	IEP	HCCA
BP	GO:0051052	regulation of DNA metabolic process	IEP	HCCA
BP	GO:0051315	attachment of mitotic spindle microtubules to kinetochore	IEP	HCCA
BP	GO:0065004	protein-DNA complex assembly	IEP	HCCA
BP	GO:0071824	protein-DNA complex subunit organization	IEP	HCCA
BP	GO:1903047	mitotic cell cycle process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003874	CDC45	421	590
IPR003874	CDC45	26	417

External Links

No external refs found!

Ceric.22G068600.1 (CDC45, Ceric.22G068600)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation