Ceric.22G065600.1 (CHR24, Ceric.22G065600)

Aliases : CHR24, Ceric.22G065600

Description : not classified & original description: pacid=50613904 polypeptide=Ceric.22G065600.1.p locus=Ceric.22G065600 ID=Ceric.22G065600.1.v2.1 annot-version=v2.1

Gene families : OG0005354 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005354_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.22G065600.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00159p00042980	CHR24,...	Chromatin organisation.chromatin remodeling...	0.04	OrthoFinder output from all 47 species
AT5G63950	CHR24	chromatin remodeling 24	0.07	OrthoFinder output from all 47 species
Aop_g13293	CHR24	chromatin remodeling factor *(ERCC6) & original description: none	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000441.21	CHR24	Protein CHROMATIN REMODELING 24 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001292.6	No alias	No description available	0.02	OrthoFinder output from all 47 species
Cre03.g183350	CHR24	Protein CHROMATIN REMODELING 24 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
Ehy_g16240	CHR24	chromatin remodeling factor *(ERCC6) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01026450001	CHR24	Chromatin organisation.chromatin remodeling...	0.04	OrthoFinder output from all 47 species
Gb_17075	CHR24	chromatin remodeling factor (ERCC6)	0.04	OrthoFinder output from all 47 species
LOC_Os04g59620.1	CHR24, LOC_Os04g59620	chromatin remodeling factor (ERCC6)	0.02	OrthoFinder output from all 47 species
LOC_Os04g59624.2	CHR24, LOC_Os04g59624	chromatin remodeling factor (ERCC6)	0.05	OrthoFinder output from all 47 species
Len_g15458	CHR24	chromatin remodeling factor *(ERCC6) & original description: none	0.03	OrthoFinder output from all 47 species
MA_18372g0010	CHR24	Protein CHROMATIN REMODELING 24 OS=Arabidopsis thaliana...	0.07	OrthoFinder output from all 47 species
Mp1g29760.1	CHR24	chromatin remodeling factor (ERCC6)	0.06	OrthoFinder output from all 47 species
Ore_g25296	CHR24	chromatin remodeling factor *(ERCC6) & original description: none	0.05	OrthoFinder output from all 47 species
Solyc01g068280.3.1	CHR24, Solyc01g068280	chromatin remodeling factor (ERCC6)	0.05	OrthoFinder output from all 47 species
Zm00001e007521_P001	CHR24, Zm00001e007521	chromatin remodeling factor (ERCC6)	0.09	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008094	ATP-dependent activity, acting on DNA	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEA	Interproscan
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003678	DNA helicase activity	IEP	HCCA
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006260	DNA replication	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
BP	GO:0008150	biological_process	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
MF	GO:0043138	3'-5' DNA helicase activity	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0050896	response to stimulus	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000330	SNF2_N	274	398

External Links

No external refs found!

Ceric.22G065600.1 (CHR24, Ceric.22G065600)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation