Ceric.22G022700.1 (TEM1, EDF1, Ceric.22G022700)

Aliases : TEM1, EDF1, Ceric.22G022700

Description : AP2-RAV-type transcription factor *(EDF) & original description: pacid=50613917 polypeptide=Ceric.22G022700.1.p locus=Ceric.22G022700 ID=Ceric.22G022700.1.v2.1 annot-version=v2.1

Gene families : OG0000941 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000941_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.22G022700.1

Target	Alias	Description	ECC score	Gene Family Method
Adi_g058439	EDF4, RAV1	AP2-RAV-type transcription factor *(EDF) & original...	0.03	OrthoFinder output from all 47 species
Adi_g114045	NGA1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g32030	EDF4, RAV1	AP2-RAV-type transcription factor *(EDF) & original...	0.04	OrthoFinder output from all 47 species
Ceric.20G072500.1	EDF2, AtRAV2,...	AP2-RAV-type transcription factor *(EDF) & original...	0.06	OrthoFinder output from all 47 species
Ceric.20G072600.1	EDF2, AtRAV2,...	AP2-RAV-type transcription factor *(EDF) & original...	0.05	OrthoFinder output from all 47 species
Dac_g22480	EDF4, RAV1	AP2-RAV-type transcription factor *(EDF) & original...	0.03	OrthoFinder output from all 47 species
Dac_g39956	TEM1, EDF1	AP2-RAV-type transcription factor *(EDF) & original...	0.02	OrthoFinder output from all 47 species
Dde_g29898	NGA3	RAV/NGATHA-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g48458	EDF4, RAV1	AP2-RAV-type transcription factor *(EDF) & original...	0.02	OrthoFinder output from all 47 species
GSVIVT01011947001	EDF2, AtRAV2,...	RNA biosynthesis.transcriptional activation.B3...	0.03	OrthoFinder output from all 47 species
LOC_Os01g04750.1	EDF2, AtRAV2,...	transcription factor (RAV/NGATHA). transcription factor (AP2-RAV)	0.03	OrthoFinder output from all 47 species
LOC_Os01g49830.1	EDF2, AtRAV2,...	transcription factor (RAV/NGATHA). transcription factor (AP2-RAV)	0.03	OrthoFinder output from all 47 species
LOC_Os06g01860.1	LOC_Os06g01860	transcription factor (RAV/NGATHA)	0.03	OrthoFinder output from all 47 species
LOC_Os08g06120.1	NGA1, LOC_Os08g06120	transcription factor (RAV/NGATHA)	0.03	OrthoFinder output from all 47 species
Len_g14264	EDF4, RAV1	AP2-RAV-type transcription factor *(EDF) & original...	0.03	OrthoFinder output from all 47 species
Lfl_g21540	NGA1	RAV/NGATHA-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
MA_3503583g0010	NGA1	transcription factor (RAV/NGATHA)	0.04	OrthoFinder output from all 47 species
MA_70029g0010	NGA1	transcription factor (RAV/NGATHA)	0.06	OrthoFinder output from all 47 species
Nbi_g33705	EDF2, AtRAV2,...	AP2-RAV-type transcription factor *(EDF) & original...	0.05	OrthoFinder output from all 47 species
Ppi_g32810	EDF2, AtRAV2,...	AP2-RAV-type transcription factor *(EDF) & original...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011516	EDF2, AtRAV2,...	AP2-RAV-type transcription factor *(EDF) & original...	0.03	OrthoFinder output from all 47 species
Spa_g28812	EDF2, AtRAV2,...	AP2-RAV-type transcription factor *(EDF) & original...	0.03	OrthoFinder output from all 47 species
Zm00001e000156_P001	NGA3, Zm00001e000156	transcription factor (RAV/NGATHA)	0.05	OrthoFinder output from all 47 species
Zm00001e039393_P002	Zm00001e039393	transcription factor (RAV/NGATHA)	0.03	OrthoFinder output from all 47 species
Zm00001e040214_P001	NGA3, Zm00001e040214	transcription factor (RAV/NGATHA)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	181	228
IPR003340	B3_DNA-bd	359	459

External Links

No external refs found!

Ceric.22G022700.1 (TEM1, EDF1, Ceric.22G022700)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation