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  5. Ceric.21G045800.1

Ceric.21G045800.1 (EMB2453, ATPPR5,...)


Aliases : EMB2453, ATPPR5, Ceric.21G045800

Description : not classified & original description: pacid=50604035 polypeptide=Ceric.21G045800.1.p locus=Ceric.21G045800 ID=Ceric.21G045800.1.v2.1 annot-version=v2.1


Gene families : OG0002119 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002119_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.21G045800.1
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AT3G53170 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
Azfi_s0466.g072796 No alias not classified & original description: CDS=82-1554 0.03 OrthoFinder output from all 47 species
Dac_g11531 EMB2453, ATPPR5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01022204001 EMB2453, ATPPR5 Pentatricopeptide repeat-containing protein At4g39620,... 0.03 OrthoFinder output from all 47 species
GSVIVT01032162001 No alias Pentatricopeptide repeat-containing protein At3g53170... 0.03 OrthoFinder output from all 47 species
LOC_Os02g51480.1 EMB2453, ATPPR5,... Pentatricopeptide repeat-containing protein PPR5... 0.03 OrthoFinder output from all 47 species
LOC_Os03g19650.3 EMB2750, LOC_Os03g19650 Pentatricopeptide repeat-containing protein At3g06430,... 0.03 OrthoFinder output from all 47 species
Lfl_g02007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006835 dicarboxylic acid transport IEP HCCA
MF GO:0009975 cyclase activity IEP HCCA
MF GO:0009976 tocopherol cyclase activity IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
InterPro domains Description Start Stop
IPR033443 PPR_long 308 412
IPR002885 Pentatricopeptide_repeat 271 301
IPR002885 Pentatricopeptide_repeat 215 266
IPR002885 Pentatricopeptide_repeat 428 457
IPR002885 Pentatricopeptide_repeat 145 188
No external refs found!