1. Home
  2. Species
  3. Ceratopteris richardii
  4. Sequence
  5. Ceric.21G024100.1

Ceric.21G024100.1 (Ceric.21G024100)


Aliases : Ceric.21G024100

Description : pre-60S ribosomal subunit assembly factor *(NOP16) & original description: pacid=50602604 polypeptide=Ceric.21G024100.1.p locus=Ceric.21G024100 ID=Ceric.21G024100.1.v2.1 annot-version=v2.1


Gene families : OG0005949 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005949_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.21G024100.1
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
Aob_g00767 No alias pre-60S ribosomal subunit assembly factor *(NOP16) &... 0.04 OrthoFinder output from all 47 species
MA_16514g0010 No alias pre-60S ribosomal subunit assembly factor (NOP16) 0.04 OrthoFinder output from all 47 species
Pir_g11993 No alias pre-60S ribosomal subunit assembly factor *(NOP16) &... 0.03 OrthoFinder output from all 47 species
Zm00001e031413_P001 Zm00001e031413 pre-60S ribosomal subunit assembly factor (NOP16) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR019002 Ribosome_biogenesis_Nop16 3 80
IPR019002 Ribosome_biogenesis_Nop16 97 166
No external refs found!