Aliases : ATL6, Ceric.21G003900
Description : RING-H2-class ATL-subclass E3 ubiquitin ligase & original description: pacid=50604092 polypeptide=Ceric.21G003900.1.p locus=Ceric.21G003900 ID=Ceric.21G003900.1.v2.1 annot-version=v2.1
Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00001p00263220 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00002p00203540 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00044p00211560 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00077p00070720 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
Adi_g044123 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Adi_g104170 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Adi_g117766 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Aev_g15196 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Ala_g22077 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Als_g07858 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Aob_g04240 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g16315 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Aop_g26269 | BRH1 | E3 ubiquitin ligase *(BRH) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aop_g70676 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene61901.t1 | Aspi01Gene61901 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0006.g010071 | No alias | not classified & original description: CDS=1-183 | 0.03 | OrthoFinder output from all 47 species | |
Cba_g31712 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Cba_g49099 | BRH1 | E3 ubiquitin ligase *(BRH) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g70777 | BRH1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ceric.07G057800.1 | ATL6, Ceric.07G057800 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.09G083300.1 | Ceric.09G083300 | not classified & original description: pacid=50586861... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.15G075700.1 | Ceric.15G075700 | not classified & original description: pacid=50639640... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.25G065700.1 | Ceric.25G065700 | not classified & original description: pacid=50593844... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.35G023500.1 | Ceric.35G023500 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Dac_g11553 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g38215 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g05771 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g06688 | MEE16 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g16355 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g22611 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g27968 | ATL4H | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01015682001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01019530001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
Gb_28932 | No alias | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
Gb_40635 | RHA2A | RHA2 signal transducer of abscisic acid perception | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os04g49170.1 | LOC_Os04g49170 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os05g29710.1 | LOC_Os05g29710 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os05g36310.1 | LOC_Os05g36310 | RING-H2 finger protein ATL77 OS=Arabidopsis thaliana... | 0.07 | OrthoFinder output from all 47 species | |
LOC_Os06g34470.1 | RHA1B, LOC_Os06g34470 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os06g34640.1 | LOC_Os06g34640 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os06g34880.1 | ATL43, LOC_Os06g34880 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
Len_g44328 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Len_g44401 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
MA_201391g0010 | BRH1 | Probable E3 ubiquitin-protein ligase RHA1A... | 0.03 | OrthoFinder output from all 47 species | |
MA_391931g0010 | No alias | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
MA_43543g0010 | ATL2, TL2 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
Mp1g27170.1 | No alias | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
Ore_g03798 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g04496 | DEP | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ore_g27916 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g28091 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Pir_g02769 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Pir_g02997 | BRH1 | E3 ubiquitin ligase *(BRH) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Pnu_g01184 | BRH1 | E3 ubiquitin ligase *(BRH) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g05782 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g46048 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0001.g000797 | ATL8 | not classified & original description: CDS=1-573 | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0003.g001460 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0044.g013072 | ATL8 | not classified & original description: CDS=1-573 | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0062.g015449 | No alias | not classified & original description: CDS=1-711 | 0.05 | OrthoFinder output from all 47 species | |
Solyc02g038805.1.1 | Solyc02g038805 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
Solyc02g083660.1.1 | Solyc02g083660 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Solyc03g123690.1.1 | Solyc03g123690 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Solyc04g009780.1.1 | Solyc04g009780 | Putative RING-H2 finger protein ATL71 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
Solyc04g074790.3.1 | Solyc04g074790 | RING-H2-class E3 ligase | 0.05 | OrthoFinder output from all 47 species | |
Solyc06g150136.1.1 | Solyc06g150136 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
Solyc10g081780.3.1 | Solyc10g081780 | Putative RING-H2 finger protein ATL71 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Solyc11g005320.1.1 | Solyc11g005320 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
Spa_g01499 | ATL6 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
Spa_g02204 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g11355 | No alias | E3 ubiquitin ligase *(BRH) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Spa_g17343 | ATL6 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Spa_g41285 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
Tin_g03083 | No alias | RING-H2-class ATL-subclass E3 ubiquiTin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
Tin_g06774 | No alias | RING-H2-class ATL-subclass E3 ubiquiTin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g31919 | BRH1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e007957_P001 | ATL6, Zm00001e007957 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e023585_P001 | Zm00001e023585 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e039314_P001 | Zm00001e039314 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005215 | transporter activity | IEP | HCCA |
MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
BP | GO:0006811 | monoatomic ion transport | IEP | HCCA |
BP | GO:0006812 | monoatomic cation transport | IEP | HCCA |
MF | GO:0008324 | monoatomic cation transmembrane transporter activity | IEP | HCCA |
MF | GO:0015075 | monoatomic ion transmembrane transporter activity | IEP | HCCA |
MF | GO:0015267 | channel activity | IEP | HCCA |
MF | GO:0015276 | ligand-gated monoatomic ion channel activity | IEP | HCCA |
CC | GO:0016020 | membrane | IEP | HCCA |
MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
MF | GO:0022834 | ligand-gated channel activity | IEP | HCCA |
MF | GO:0022836 | gated channel activity | IEP | HCCA |
MF | GO:0022839 | monoatomic ion gated channel activity | IEP | HCCA |
MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 134 | 177 |
No external refs found! |