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  5. Ceric.20G052200.1

Ceric.20G052200.1 (Ceric.20G052200)


Aliases : Ceric.20G052200

Description : substrate adaptor of SCF E3 ubiquitin ligase complex & original description: pacid=50566449 polypeptide=Ceric.20G052200.1.p locus=Ceric.20G052200 ID=Ceric.20G052200.1.v2.1 annot-version=v2.1


Gene families : OG0003973 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003973_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.20G052200.1

Target Alias Description ECC score Gene Family Method Actions
Sam_g11296 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.03 OrthoFinder output from all 47 species
Smo76555 No alias F-box protein At4g00755 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc01g091720.3.1 Solyc01g091720 F-box protein At4g00755 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019786 Atg8-specific peptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 13 52
No external refs found!