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  5. Ceric.20G030700.1

Ceric.20G030700.1 (GC5, Ceric.20G030700)


Aliases : GC5, Ceric.20G030700

Description : Golgin-type membrane tethering protein *(GC5/TMF) & original description: pacid=50566279 polypeptide=Ceric.20G030700.1.p locus=Ceric.20G030700 ID=Ceric.20G030700.1.v2.1 annot-version=v2.1


Gene families : OG0003150 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003150_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.20G030700.1
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00089980 GC5,... Vesicle trafficking.target membrane tethering.Golgi... 0.02 OrthoFinder output from all 47 species
AT1G79830 GC5 golgin candidate 5 0.04 OrthoFinder output from all 47 species
Aev_g29811 GC5 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.05 OrthoFinder output from all 47 species
Ala_g08575 GC5 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.04 OrthoFinder output from all 47 species
Als_g09947 GC5 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.05 OrthoFinder output from all 47 species
Aob_g16762 GC5 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.04 OrthoFinder output from all 47 species
Azfi_s0092.g043112 GC5 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.05 OrthoFinder output from all 47 species
Cre03.g187000 GC5 Golgin candidate 5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g07167 GC5 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.03 OrthoFinder output from all 47 species
Ehy_g07090 GC5 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.04 OrthoFinder output from all 47 species
GSVIVT01038690001 GC5 Vesicle trafficking.target membrane tethering.Golgi... 0.07 OrthoFinder output from all 47 species
Gb_20198 GC5 golgin (GC5/TMF) 0.03 OrthoFinder output from all 47 species
Lfl_g19932 GC5 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.03 OrthoFinder output from all 47 species
Mp8g06100.1 GC5 golgin (GC5/TMF) 0.03 OrthoFinder output from all 47 species
Nbi_g01404 GC5 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.02 OrthoFinder output from all 47 species
Ore_g05368 GC5 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.03 OrthoFinder output from all 47 species
Pir_g14288 GC5 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.02 OrthoFinder output from all 47 species
Solyc06g066610.4.1 GC5, Solyc06g066610 golgin (GC5/TMF) 0.04 OrthoFinder output from all 47 species
Tin_g20654 GC5 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.04 OrthoFinder output from all 47 species
Zm00001e026507_P001 GC5, Zm00001e026507 golgin (GC5/TMF) 0.05 OrthoFinder output from all 47 species
Zm00001e026510_P001 GC5, Zm00001e026510 Golgin candidate 5 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e032402_P001 GC5, Zm00001e032402 golgin (GC5/TMF) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0008318 protein prenyltransferase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0018342 protein prenylation IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0097354 prenylation IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR022091 TMF_TATA-bd 827 928
IPR022092 TMF_DNA-bd 410 478
No external refs found!