Aliases : SDG30, ATX2, Ceric.20G024500
Description : class-III histone methyltransferase *(Trx) & original description: pacid=50567012 polypeptide=Ceric.20G024500.1.p locus=Ceric.20G024500 ID=Ceric.20G024500.1.v2.1 annot-version=v2.1
Gene families : OG0004303 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004303_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ceric.20G024500.1 | |
Cluster | HCCA: Cluster_81 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00049p00115800 | SDG30, ATX2,... | Chromatin organisation.histone modifications.histone... | 0.07 | OrthoFinder output from all 47 species | |
AT1G05830 | SDG30, ATX2 | trithorax-like protein 2 | 0.1 | OrthoFinder output from all 47 species | |
Adi_g013424 | ATX1, SDG27 | class-III histone methyltransferase *(Trx) & original... | 0.06 | OrthoFinder output from all 47 species | |
Aev_g32400 | ATX1, SDG27 | class-III histone methyltransferase *(Trx) & original... | 0.04 | OrthoFinder output from all 47 species | |
Ala_g02683 | ATX1, SDG27 | class-III histone methyltransferase *(Trx) & original... | 0.06 | OrthoFinder output from all 47 species | |
Als_g15203 | SDG30, ATX2 | class-III histone methyltransferase *(Trx) & original... | 0.04 | OrthoFinder output from all 47 species | |
Als_g32921 | ATX1, SDG27 | class-III histone methyltransferase *(Trx) & original... | 0.04 | OrthoFinder output from all 47 species | |
Aob_g29671 | ATX1, SDG27 | class-III histone methyltransferase *(Trx) & original... | 0.04 | OrthoFinder output from all 47 species | |
Aop_g20532 | ATX1, SDG27 | class-III histone methyltransferase *(Trx) & original... | 0.06 | OrthoFinder output from all 47 species | |
Aspi01Gene13213.t1 | SDG30, ATX2,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene13214.t1 | SDG30, ATX2,... | class-III histone methyltransferase *(Trx) & original... | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0054.g033848 | ATX1, SDG27 | class-III histone methyltransferase *(Trx) & original... | 0.06 | OrthoFinder output from all 47 species | |
Cba_g38525 | SDG30, ATX2 | class-III histone methyltransferase *(Trx) & original... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g05840 | ATX1, SDG27 | class-III histone methyltransferase *(Trx) & original... | 0.09 | OrthoFinder output from all 47 species | |
Ehy_g21792 | ATX1, SDG27 | class-III histone methyltransferase *(Trx) & original... | 0.04 | OrthoFinder output from all 47 species | |
Gb_04715 | No alias | Histone-lysine N-methyltransferase TRX1 OS=Oryza sativa... | 0.03 | OrthoFinder output from all 47 species | |
Gb_27375 | ATX1, SDG27 | class III/Trithorax histone methyltransferase component... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os09g04890.1 | SDG30, ATX2,... | Histone-lysine N-methyltransferase TRX1 OS=Oryza sativa... | 0.09 | OrthoFinder output from all 47 species | |
Lfl_g35891 | SDG30, ATX2 | class-III histone methyltransferase *(Trx) & original... | 0.1 | OrthoFinder output from all 47 species | |
Mp7g16780.1 | SDG30, ATX2 | Histone-lysine N-methyltransferase TRX1 OS=Oryza sativa... | 0.05 | OrthoFinder output from all 47 species | |
Msp_g13971 | SDG30, ATX2 | class-III histone methyltransferase *(Trx) & original... | 0.04 | OrthoFinder output from all 47 species | |
Pir_g12237 | ATX1, SDG27 | class-III histone methyltransferase *(Trx) & original... | 0.09 | OrthoFinder output from all 47 species | |
Ppi_g08519 | ATX1, SDG27 | class-III histone methyltransferase *(Trx) & original... | 0.02 | OrthoFinder output from all 47 species | |
Solyc09g098260.3.1 | SDG30, ATX2,... | Histone-lysine N-methyltransferase ATX2 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
Spa_g09107 | ATX1, SDG27 | class-III histone methyltransferase *(Trx) & original... | 0.06 | OrthoFinder output from all 47 species | |
Tin_g22080 | SDG30, ATX2 | class-III histone methyltransferase *(Trx) & original... | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e033644_P001 | SDG30, ATX2,... | class III/Trithorax histone methyltransferase component... | 0.06 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
MF | GO:0003917 | DNA topoisomerase type I (single strand cut, ATP-independent) activity | IEP | HCCA |
MF | GO:0004402 | histone acetyltransferase activity | IEP | HCCA |
MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006265 | DNA topological change | IEP | HCCA |
BP | GO:0006325 | chromatin organization | IEP | HCCA |
BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0006473 | protein acetylation | IEP | HCCA |
BP | GO:0006475 | internal protein amino acid acetylation | IEP | HCCA |
BP | GO:0006508 | proteolysis | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
MF | GO:0008080 | N-acetyltransferase activity | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
MF | GO:0008233 | peptidase activity | IEP | HCCA |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
MF | GO:0008270 | zinc ion binding | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
MF | GO:0016410 | N-acyltransferase activity | IEP | HCCA |
BP | GO:0016570 | histone modification | IEP | HCCA |
BP | GO:0016573 | histone acetylation | IEP | HCCA |
BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | HCCA |
BP | GO:0018394 | peptidyl-lysine acetylation | IEP | HCCA |
MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0043543 | protein acylation | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0051276 | chromosome organization | IEP | HCCA |
MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | HCCA |
BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
BP | GO:0071103 | DNA conformation change | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No external refs found! |