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  5. Ceric.1Z323000.1

Ceric.1Z323000.1 (Ceric.1Z323000)


Aliases : Ceric.1Z323000

Description : component *(APC5) of (APC/C)-dependent ubiquitination platform subcomplex & original description: pacid=50637013 polypeptide=Ceric.1Z323000.1.p locus=Ceric.1Z323000 ID=Ceric.1Z323000.1.v2.1 annot-version=v2.1


Gene families : OG0004795 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004795_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.1Z323000.1
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
AT1G06590 No alias unknown protein; Has 380 Blast hits to 268 proteins in... 0.03 OrthoFinder output from all 47 species
Adi_g058437 No alias component *(APC5) of (APC/C)-dependent ubiquitination... 0.04 OrthoFinder output from all 47 species
Ehy_g18715 No alias component *(APC5) of (APC/C)-dependent ubiquitination... 0.03 OrthoFinder output from all 47 species
Ore_g30303 No alias component *(APC5) of (APC/C)-dependent ubiquitination... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR026000 Apc5_dom 100 198
No external refs found!